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ET13942

CSHL Arabidopsis genetrap mutant lines

Original: ET13942

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13942

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13128 [Map]; Strand: w
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (CDS)
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: -399; Region: promoter
    Flanking Genome Sequence: ET13942 - 3-prime edge
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACATTTCTA 
    TATAATATTG GCTAAAAGCT ATTGGTTCTT CTCCTTCGAC CACACGGATT
    GTTTAGGATC TTGTGAAAAT TGAGGTCGTT TTTTTCAGTG TCTCTAGTCC
    TGTTTGAATT GAATCTCTCT AGTGTCCTTG ATCTGGGGAA AACTTACAGT
    GTTACTTTTG TTATATATCA GTCCAAGAGG GTTTTTAGCA ACTCATTTCT
    TTCAAAGGTA TTTTCTTCCC TTTACTTGTT AAATATTTGC TTCGACAACA
    TTTTCTTTGC TCTTTACACC CTTTTGGGCT TATATGTTAG TCTCATACCT
    CTCATCGTTT TTCTTATGCA GGACTCTACT GGAGCTAATG GTCAGCAGTG
    ATAATTGTGT AATCAAACTT CAAATCCTAG TGTTGATGTG TACCTTGTTG
    TTCTGACAAT TGTCTGTTAT ACAGGACTAT TGTTTCGCTT CCGAAACCCG
    CAAGCAAGTA TATGTACGGA AGCTCGTCCA AAGAACATC

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR