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ET13952

CSHL Arabidopsis genetrap mutant lines

Original: ET13952

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13952

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23268011 [Map]; Strand: c
      • AT5G57410.3 - [+] show detail - Afadin/alpha-actinin-binding protein
        Distance: -128; Region: promoter
      • AT5G57410.1 - [+] show detail - Afadin/alpha-actinin-binding protein
        Distance: -140; Region: promoter
      • AT5G57410.2 - [+] show detail - Afadin/alpha-actinin-binding protein
        Distance: -193; Region: promoter
    Flanking Genome Sequence: ET13952 - 3-prime edge 
    CCCTAGCGCC AACTGTTTAG GCTTTAAGAG AAGGAAGAAT GTGGGCCCGT 
    ACTGTTTTAA TTGGGCCTAT TAAGGCTTTA TTGAGCTGAT GTGTAAGGCC 
    TGTTTAGACT TGTGCTAATG TTGGATGAGC ATGACAAAAT GATTATCATT 
    GTTTGGTTAG AAACAGACCA AAACAGCGGG TAAGTGTTTG ATTGTTATTT 
    AAATTTTGAT TATTATCGGG GAGTGGAATA AGCAAACATT AACGTATGTC 
    TGTAGAATCG AAAAAAAACA AAAATCGAGA CAAATTAATT AGATGATTCA 
    ATATAACATG TAGACGTAGT AATGCGTTAA ACTATAGTCC TAAATTGAGA 
    TCTATGAAAC

AT5G57410.1

Model type
Protein coding
Short Description
Afadin/alpha-actinin-binding protein
Computational Description
Afadin/alpha-actinin-binding protein; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT2G18876.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57410.2

Model type
Protein coding
Short Description
Afadin/alpha-actinin-binding protein
Computational Description
Afadin/alpha-actinin-binding protein; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT2G18876.1); Has 9027 Blast hits to 6961 proteins in 616 species: Archae - 59; Bacteria - 725; Metazoa - 4928; Fungi - 724; Plants - 295; Viruses - 11; Other Eukaryotes - 2285 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57410.3

Model type
Protein coding
Short Description
Afadin/alpha-actinin-binding protein
Computational Description
Afadin/alpha-actinin-binding protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT2G18876.1).
Link
InterPro Scan - TAIR