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ET13955

CSHL Arabidopsis genetrap mutant lines

Original: ET13955

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13955

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 105119 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: -570; Region: promoter
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: -604; Region: promoter
      • AT2G01175.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET13955 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACACAAA 
    ATCATGTTAG TCTCGAGACT AACAATCAAA GATTTGCTAT CCAAAACAAA 
    CTAAAAAAGA TTTGATGCAA TATTGAGAGG AAAAACTGAA CCTGGTTTCT 
    CTGATTTGAA TTCCATTTTG TCAGACTCTC ATCCGTGCAA CAGAATTTAT 
    AACACATTAA CTAACTCTTG TTAACCACTC GTAATGCTAA AACATTATAT 
    AACCACAATC TTTGAACTCT CCTTCTTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 105056 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: -507; Region: promoter
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: -541; Region: promoter
      • AT2G01175.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET13955 - 5-prime edge 
    TTCTCCCTGA TTTTGTGGAT CGTGGTAACA TAACCACAAA GTTGTCTATT 
    TTATGATTTG AACATTCTAC ACAGTCATCC TCATCAGTGG CAAATTAACC 
    AGGTTTGTGT ATCAAAGAGT AGGCCATGTT CTGAGTATCT TCAAGAAGAG 
    GATGATGTTT TTTTGTATAG TTTTTGTCTT TGATATGTTT TCAAATGAAT 
    CTTGTATACT TTGTCATATT TATTGTCATG AATCTTTGTT ATTCAAAATG 
    TGTTTATCAA AATTGTATCA AATTTTTTGT ATAGGTTGGC TTCTCTATCT 
    TTCTTTTCAA GCAATCTAAA CTCAAATACC AAAATATTTT TTCAAATTTG 
    TCTTTCTTAA GAATTCCTAC TATTGGACAT GAATATTTTT GAGAGTCCCT 
    AAGTTAGTCC TTAGTTTTAT ATTTGTCAAA ATTTATATTA GAAAA

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01175.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR