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ET13984

CSHL Arabidopsis genetrap mutant lines

Original: ET13984

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13984

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6026577 [Map]; Strand: w
      • AT2G14220.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13984 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTGCCACCA 
    ATATGGTTTA CATTGTTGAT ATTCACATCC TTTGTATGAA ACCTTTATAT 
    TTTACATCTC ACTCGACGAT ACACCACAAC AAAATTGAAG AGCCGAACGC 
    AAACACCGAC ACATTCTGAA TGTGGCAAGA GCATTGCGCT TTCAAGGACA 
    CTTACCAATC CAATTTTGGG GTGAGTGTAT CCTCACAGCT GGTTATTTAA 
    TTAATCGTAT TCCTTCATCA GTTCTGAATG GTCTAACACC ATATGAGAAA 
    TTGTATAAGA AAGAGCCCGA TTATACACAT CTCAAAGTAT TTGGGAGCTT 
    GTGCTATGCT CATAATCAAG GTCATAAGGG AGACAAGTTT GAATCGAGAA 
    GTTGAAAGTG TGTGTTTGTT GGCTATCCAT ATGGCAAAAA GGGTTGGAGG 
    CTATATGATT GCGAAACAGA GGAGTTTT

AT2G14220.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR