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ET13990

CSHL Arabidopsis genetrap mutant lines

Original: ET13990

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13990

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6026582 [Map]; Strand: w
      • AT2G14220.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13990 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    AATGGAACCG AGTTCACAAG TTTGGCAAAC TATTTTCGAC AGCAAGGGAT 
    TCTTTAAGAG ACTTCCTGTG TGGGTACACC ACAACAAAAT TGAAGAGCCG 
    AACGCAAACA CCGACACATT CTGAATGTGG CAAGAGCATT GCGCTTTCAA 
    GGACACTTAC CAATCCAATT TTGGGGTGAG TGTATCCTCA CAGCTGGTTA 
    TTTAATTAAT CGTATTCCTT CATCAGTTCT GAATGGTCTA ACACCATATG 
    AGAAATTGTA TAAGAAAGAG CCCGATTATA CACATCTCAA AGTATTTGGG 
    AGCTTGTGCT ATGCTCATAA TCAAGGTCAT AAGGGAGACA AGTTTGAATC 
    GAGAAGTTGA AAGTGTGTGT TTGTTGGCTA TCCATATGGC AAAAAGGGTT 
    GGAGGCTATA TGATTGCGAA ACAGAGGAGT TTTT

AT2G14220.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR