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ET13998

CSHL Arabidopsis genetrap mutant lines

Original: ET13998

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13998

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 562307 [Map]; Strand: c
      • AT4G01350.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET13998 - 3-prime edge 
    GAAAACGGAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAT 
    GTTTAATGAT ATAATGAGTG GTTCTAGATA TCATGACTGT ATTATTTCAT 
    TAGCGTTTCT ATTTTTATTT CCAAGAAAAG ATATGTAATA TAGATTTATT 
    TTTGTTTTCT AATAAAAGAT GCTTATTTAT CAAGAAAGTA GATACTATCA 
    TCATGATCAT TGTTATACGA GAGCATGATC ACATAATGAA CAAAAGAGAT 
    GAAATTAAGT TCAAAGCAGT AACAAAGGAA ACTAAACAAA ATTGGTCTAA 
    AGATAATGGT TTTGACCGGG TTCGAACCGG AAACCTTTGG TGTGTTAAAC 
    TGACGTGATA ACCAACTACA CCACGAAACC TGTATGCTTC TGCCCAAAGT 
    CTTTATTATT ACCCTAATTA TTTGTTAATC TGCATAGTTA GGGTTTCTGG 
    AATCTAGCAT CGTTTTAACT GAATGGATTC AATCCTCAAA CGTAGATTAA 
    CAAAGAATTA GGTAAACAGA GATGTGTTTT GTCTTACACG GTCAAAGCCA 
    AAGAGATGTG TTTTGTCTTA ACACAAGAAC ACACAAAGTA ACCAAAGAGA 
    TAAACTCTGA ATTGTCAATT TTCAAGTCTG CCTCCTTAAC TTGACATTGA 
    AGTCTTTAAG TACACAAAAA TAAGAAAGAA ACTAACCACT AAATCTTCTA 
    CTAAATTGAA GTTTTT

AT4G01350.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR