ET14

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

late flowering

Anatomical entity /structure development stage	Phenotypes
whole plant flowering stage (PO:0007016)	late (PATO:0000693)

Original: ET14

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 19392536 [Map]; Strand: c
- AT2G47240.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
  Distance: -22; Region: promoter

CGNGNCCGAC CGTTTTCATC CCTACCTNTA TCAACCAACT CATATATTAT 
TATATAAACC AACATCCATT TCTCAGCTCC TCATTAAATT ATCTTCTTTC 
TCTTCCNCNC NGAACACTNC CAAATTATTT CTANGCTAAN ANAATCTTTA 
AAAATAACAA ANCTTCTNNT ATAATTNTCC GACCTACCGG ATTNTCTCCA 
TTGATCTGAA N

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: ET14 - 5-prime edge
```
CCAGGCCAGG TCTGTGTATT TCTTTCAT
```

AT2G47240.1

Model type: Protein coding
Short Description: AMP-dependent synthetase and ligase family protein
Curator Summary: Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis
Computational Description: LONG-CHAIN ACYL-COA SYNTHASE 1 (LACS1); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, very long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid biosynthetic process, cutin biosynthetic process, wax biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G23850.1); Has 55133 Blast hits to 51773 proteins in 3295 species: Archae - 1024; Bacteria - 35525; Metazoa - 2495; Fungi - 1959; Plants - 1853; Viruses - 1; Other Eukaryotes - 12276 (source: NCBI BLink).
Link: InterPro Scan - TAIR