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ET14003

CSHL Arabidopsis genetrap mutant lines

Original: ET14003

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14003

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12857420 [Map]; Strand: c
      • AT4G25010.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -879; Region: promoter
    Flanking Genome Sequence: ET14003 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTGTAAA 
    AATGAACGTT TAGGTGTCCG CCACGTGTGA CATATTTTAT GTTGTCTCCG 
    AGCACTCTTG AACTTCATGA TTAGGCAGCC AAAATTAGGT CCGTAACTAA 
    TTTTATTTTA TTAGCTCTCA TAACAACAAA TAATATCTTG TCCCTGTGAT 
    AATGTATATA AACGCGTCGA GAAGAAAGCA AACAATATAA ATTGTATAAA 
    ACAAAGAATA GTGCGTTTCA TCTTAGACGC GACTGTCGCG TGTGTAAACC 
    GTATAGGGTA AGATTCACCA TCATGCTTCT TGATGTCTCC ACTTGACTAC 
    TTTCATGTTA ATCTTATTAT CTACACAAAT ATTATCGTAT CCAACACCAA 
    TCTTCAACTA ATTTTAAAAA ATCATGCTTT ATATTTCTAT AATAATATAA 
    TTTTATAACC GAACCAAAAT TTTAACAAAA ATTAGTAATA TGCAACTAGT 
    TAAGCTTTTG GAATTAATTA TACTATGATA TGTCTAGGTT GTAATTAAGC 
    TTTAATTTTA CCGTAATACA ACTTCTCACT CCACTTATAG AGAGTAATTA 
    TACACTAGGG AAATGAAAGG TGGCATGTTA AAATGTTGAG TTAGAAGTTC 
    AGGCTATGAA TATTGTAATC AATACCACTA CTTTTGAGGG AGTATGGCCA 
    GGTGATGCCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12857364 [Map]; Strand: c
      • AT4G25010.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -823; Region: promoter
    Flanking Genome Sequence: ET14003 - 5-prime edge 
    TCCTACTTTC TCCCTGTTTT TACTGGTATG ATGAACAAAA CGAGCAAACA 
    CGCATGGTTA ATGGAACTTA ATTCGGTATG TAACGATTCG GGTTGGAGAT 
    GGAATGGGAA CTAGAACTTT TGCAATCAAT ATTTTTGCTC CAGGAGTGTA 
    TTAAATTTAA GTGATACATG AATTGAATTT TTATTTTTAA AATGAGATGC 
    ATTTTTATAA AATATTCTTA TGTTGTGTTT AATAATTTTT TTTTCTTAGT 
    TATTATCAAT AGTAGAAAAC GTTGAAACGT GTTTATAGTA TATATATTTT 
    ACAATGCAAG CTTGGATAGT TTACATAACG CGCGTAGTTA TATGATGGCA 
    ACAAAAAGAT GTAGTTATAT CTTACATGTG TACGGAGAAC AAATATCTAA 
    ACTAATTAAT TAGCTAGTTT GAGTCCTGGT AGAATATTGG AAAATTAGAT 
    TACGTTTTTT AATACAATGA TGAAAACCAT CAAATTAAAT ATATTATTTA 
    TTTGGATGGT TAGCTAGAAA GCTATCAGCC GATCAATGGT TTAATTATAT 
    TATTGGTCAT GCCAAAGGAA CAAATTACCA ATAAGTTTTA AGGGTTTCTT 
    TGCAGTTTAG TAACGCCTAT ATTAAAAGCT CATTTATTTT TATTTG

AT4G25010.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G50800.1); Has 994 Blast hits to 947 proteins in 115 species: Archae - 0; Bacteria - 1; Metazoa - 233; Fungi - 0; Plants - 619; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).
Link
InterPro Scan - TAIR