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ET14016

CSHL Arabidopsis genetrap mutant lines

Original: ET14016

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14016

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17770905 [Map]; Strand: w
      • AT2G42660.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -2615; Region: intergenic
      • AT2G42670.1 - [+] show detail - Protein of unknown function (DUF1637)
        Distance: 871; Region: intergenic
    Flanking Genome Sequence: ET14016 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTGAGG TGTGATACCC 
    TTTGATCCCA ACCGCTTTGA ACGCAAGTAC GCAACCACGA ACAAAAGTAA 
    GCATGGAAAC AACTTAGAAA AGATCAAGAG AAACCATTAC TATGTTACGT 
    TATTAATTTG TTAATTGTTA CTCTTCATTA TAATGCATTT TTCTTATGAG 
    TGTATAAATA AAACTTCATC TCCAAATTCA TTTAAAATTT TGAGAAAAGA 
    AGATCGAAGC TAATAATCAT GGTCCTAAAG ATACGTAGGC ATGTGATGAG 
    GAAGAATTCA AAGACGGTGC CTCATTTTGC GGCGATTCTT TAGGGCAACA 
    TCAGAATTTT TTAGCTTCTT GCATGCATAA TAAATAAATA TATCAACTGG 
    ATCAACGTCC TTTTTACATT TAAAAATGGT TTTGTGCATA TAAAACGTCC 
    TTTAGGGAAA CAGTTGTTAT ATTTTTTGTC AAAAAATAAA TGGTTTGTAC 
    ATATAAAACG TATCTAATAA ACATTCACAA AAAAAAAATC CTCTGAA

AT2G42660.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G42670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1637)
Computational Description
Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 364 Blast hits to 364 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Link
InterPro Scan - TAIR