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ET14041

CSHL Arabidopsis genetrap mutant lines

Original: ET14041

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14041

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30041626 [Map]; Strand: w
      • AT1G79850.1 - [+] show detail - ribosomal protein S17
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14041 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAAGTTC 
    AAGGTTGGCG ACGTGGTCAG ACTGGAAAAG AGCAGACCCA TCAGTAAGAC 
    TAAATCATTT GTGGCGCTTC CTGTCATCGC AAGGGCCGCC AGGAAAGCCG 
    AAGCCGGAGG AGATGAACTC CTTGGCCTTC CCTTGGAGTC TCAGCAGCCG 
    GCGTAGAGAA TGATTGCTCT TTGTTTCTTT TGGTAAAGCC GTCTTTTTTT 
    TGCTCTGCTT CTGTTTGTTT GTTGTGTATC CCGGAACCAG TGTAATTTAT 
    GGAATGCTTT TGTGATTTCA TTGCTTATGC CATGAGTGTG TTTTCAATCT 
    GATTGTTTCC GACTACCAAT TGTTTGCTCT TACTT

AT1G79850.1

Model type
Protein coding
Short Description
ribosomal protein S17
Curator Summary
nuclear-encoded 30S chloroplast ribosomal protein S17
Computational Description
ribosomal protein S17 (RPS17); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plastid small ribosomal subunit, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G49400.1); Has 7449 Blast hits to 7449 proteins in 2625 species: Archae - 136; Bacteria - 5329; Metazoa - 5; Fungi - 63; Plants - 102; Viruses - 0; Other Eukaryotes - 1814 (source: NCBI BLink).
Link
InterPro Scan - TAIR