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ET14042

CSHL Arabidopsis genetrap mutant lines

Original: ET14042

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14042

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16877058 [Map]; Strand: w
      • AT4G35550.1 - [+] show detail - WUSCHEL related homeobox 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14042 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACGTGAA 
    GGTGATGACC GATGAGCAGT ATGAAACTCT CAGGAAACAG ATTGCTATTT 
    ACGGCACCAT TTGTGAGCGT CTTGTTGAGA TGCATAAAAC TCTCACTGCT 
    CAACAAGATC TTGCAGGTTT CTATCCTTTC TTCTATCATT TAGTTTCTTC 
    ATCTCACTCG ACC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16877114 [Map]; Strand: w
      • AT4G35550.1 - [+] show detail - WUSCHEL related homeobox 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14042 - 5-prime edge 
    ATCCTACTTT ATCCCTGCCT TCCGTACATT CCTCCTCCGG CGCCGGAGCC 
    GCCATTAACG TCGATCCCTT GAAGATTAGA AGAGTGATGG TTATTGGGTT 
    GTAGCTGATT ATCCCATTCC ATCATCTCTT TTGTCAGAAT TTCGCTCAGA 
    AGATTTCTCT CTTTCTCTGT GTGAACGAAG GAAACAGAGC AAAGTCAGTG 
    CTTTTTCGGG AGTAGAAGGA AAGGTAAAGG CAGAAAAGGA CAAAAAAAAC 
    TTAATTTATG TTATTCTTTT GGTCTATATT GAAATTATAA TATATAGTTT 
    CATTACAAAG GAAAAGACAA ATAAGAAGAC GGTAATGATT CTTTGACAAT 
    CGTTAAAGGA AACTATTTAA CCAACGGTTA TTTTAGTTCC TAATTTGGAA 
    ATTGACCGTT TGAGATTTCA CATACGGTTA AACGGGTACT TCCATATCTG 
    AATATTTACA TTACCATAAT CTAAATGTTA TTTGATTTAT AGTTGGAGAG 
    AGCCCTTGCT ATTTTATTTT ATGGAAATAA CA

AT4G35550.1

Model type
Protein coding
Short Description
WUSCHEL related homeobox 13
Curator Summary
Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.
Computational Description
WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR