Home
Mutant Lines
ET14043

ET14043

CSHL Arabidopsis genetrap mutant lines

Original: ET14043

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14043

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 12561766 [Map]; Strand: w
- AT4G24200.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: -822; Region: promoter

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTTGG 
GGGTGTATCA TGAAATTAAA ATCAATTCTG TAAAGTTTAG ATTTGAAATT 
TGAAATTATT TTTAAAAATC TATTTTGAGC CATTTGAAAT GAAATTTCTT 
CGGAGTTTCA TAACATTGGA TGCTAATGAA AGTATTTAAA ATCTTAGTTG 
AATAACACCA AATTATAGAT TCTAGTAAGC ATGATTTACA AATGTAAAGA 
TTTCATAACA ACAGATTTTA AAGCATAGTT TAGAATCATT AATTGAATAA 
CATTGGATTA GTGTTAAATT TCAGTTCTAT TAAATTCATG ATTGAATAAC 
ACCACCTTAT AGTTTATGCC GGATTATAAT TGGAAGAAAG AAAATATTGG 
TTTTTGAGCT ATAGTGTATA TGTTCTTATA AATTTAGTAT TTGGTATTTT 
AGAATGTATC AACAATATTT ACCATGCTAA AATCAAATAA TAAATCATAA 
AAATAAAAAA CTACTTTCAT AAATTTAAAG GTCTACATAA GAAAACTCTA 
CAAAGTAACA TATTGCAAAT ATAACAAAAA ATT

5 prime edge [+] show sequence

Chromosome: 4; Position: 12561823 [Map]; Strand: w
- AT4G24200.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: -879; Region: promoter
- AT4G24204.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon3 (3UTR)
- AT4G24204.2 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon2 (3UTR)
- AT4G24204.3 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon3 (3UTR)

CCTACTTTCT CCCTGCCCCC AAAACGCAAA CAGTTGGCAT GATAAATACA 
AATCGGTTTA CCGAAAAAGA AACAAATCCA AATGCTAGTG TGTACATTGG 
CATGGAATTG TCTTTGTTTT TGGTTGTTAA AGAATTGCAT TGTTAAATTA 
CAGATTGTAT GGAATTATAG TCTTGTGGTG ACACCAAAGA TACTCGGATC 
TTTCTTTCAC TTGTGTCGCT GAAAACTGAA AAGAACAAAT AATAATAAAA 
CGCAAAGCAA AGGGCGTTTC TTGGAAGCAT GAGTTCGCAA AATGGTGATT 
AGGCAAAGCA ACGGCGCTCA AAGCTTTTTC AACACTAATC TCTTTGATTT 
GCGTATCACC CTTCGGCAAA TCGGACACAC CTTACTTTCT TCCGACAAGA 
TCCTTTGAGC ACAGCCGCGA CAAGTGGCAG AGTGACCACA CGGTACAAAG 
AAACAGTTTC TACGTTCCTC GAAGCATATA ACACACAGTG TCGAGTAGTC 
CACATCATCC GACGAGCTAA ACGACGCCGT TTCTACATCT CCCTTCCCCG 
TTACCTCCAA CGACTCATTG ATCAACGGCG GCGTCCAAAC GGTGGTGACT 
TCTTCTTCTG CCACCAATGG AAGCCTCTGT GTGTCATCCT

AT4G24200.1

Model type: Protein coding
Short Description: Transcription elongation factor (TFIIS) family protein
Computational Description: Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24204.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24204.2

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24204.3

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR