ET14055 - RIKEN Arabidopsis Genome Encyclopedia
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ET14055

CSHL Arabidopsis genetrap mutant lines

Original: ET14055

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14055

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163575 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -379; Region: promoter
    Flanking Genome Sequence: ET14055 - 3-prime edge
    GAAACGGTAG AGGATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    GATGGTTAAG GCGGACAAAA TCGTCAATGG ATCAAACCTT TTTTTATTTA
    CCATTCATCA ATTATAGTAC GCAGTGGTCC GGATAAAAAA TAATAGAAGA
    AAACCGCAAC GGACCATCTA CGGACCGTTT TTACATACAA ATAAACTTGA
    TCCGCAGCGA TTTATTGTCC ACCCAAAAAT GAAGTAGACT AAATAGCAGA
    CAAATTAAAC CGTTTTGTCT GCTGCATCCA TTCAAAATCT TAGACTCGCT
    AAAATATGAA CAAGACAAAA TAATAAAGCG GAGGTAAGAA AGAAAAATAT
    GCCATAAACT CCAAAATTGT ATTTTACAAA TACCTAACGT TCTTTAGATT
    ATATCGAGGG TCGCTAGTAT TTAAAAGGAA AATAATAGTG ATAAAAGTGC
    TAACTTTTGT GGGAAATGGA TTCTAGGTTG AAAAAAACAG GACTTTTGTA
    AGCAATTTTC AACTTAACAA CATCATGCGG ATGCGCGGTA CAAG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163664 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -290; Region: promoter
    Flanking Genome Sequence: ET14055 - 5-prime edge
    CTAATTCTAA AATTTCAACG TGGCAGAAAA GAAGGTAATT GAATAACAAG 
    GTGATATACT CTTGAAATAA ACATGAATCT ACAAGCGATA CTTAATAGTT
    GCATGTGATG CACACGAGTA CCATCTTGTT GAAATAGTGG TAGTACAATT
    TAAGAGAAAT CCAAATACTA ATTAAAAAAG CCATCATGAT TAAAATAATT
    AGGCTTGAAA TCGTACGTAG TCAAAAGGGT TGTCCATTAA TTAAGAAATT
    AATAAAAATG GACCATCATT TCCACGTATC TACAAATCTC TCTTACCCCC
    ATATGCACAT GTCTGCGAAC CCCATCATTT AAAGCCCCAA CGTA

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR