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ET14059

CSHL Arabidopsis genetrap mutant lines

Original: ET14059

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14059

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26561132 [Map]; Strand: w
      • AT5G66550.1 - [+] show detail - Maf-like protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14059 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCCATG GAGAGAGGAT 
    TTAAGGTTTG TCTCTCTCTC TGCTATTTCT TCCCTTTTTG GTAGAAATTT 
    GAAAAAAAAT CAATGGGAAA ATGCTGATGA AATGCGAAAT ATGCTCAAAC 
    GTGAAGCTGA TACTGGGTTC TCAATCCATG GCGAGAAAGA GGATTTTGGC 
    TGAAATGGGA TATGATTACA CTATCGTGGT ATGTTCAAAT TGTGATTATT 
    ATTGTTTTGC TATGGATGTT CATAACATAA ATTGAGTTTG GCTGGGGATT 
    ATGTTTTTTT TAAGACTGCA GACATTGATG AGAAAGCTAT TAGGACAGAG 
    AAGCCTGAAG ATTTGGTTGT GGCTCTTGCT GAAGCCAAGG TACATAATAA 
    TACTCTAGGG TTTTGTAATC TTGATTCAAT GTCTTTTCAA TTTATGATGA 
    TGGTAATTGT TTTGACTAGG CAAATGAGAT TATATCGAAA TTGGGAGGTG 
    AGAGCCAGTT TGCAAAAGAT CCTCAACCAA CTCTTTTGAT TACTGCAGAC 
    ACTGTATGCT TTGATGCCTC AACACTTTTT GATTAGAATG TTAACTTTTT 
    GGTATCTTTA GCTGATGTTA TGGTGATGGA GTTTATTAGG TTGTTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9449595 [Map]; Strand: w
      • AT1G27190.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -770; Region: promoter
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET14059 - 5-prime edge 
    CGCACAATTC ATCTCACTCG ACATACTTGA AATCTTTCAC TTCCATTCAT 
    ATAAGAACAA GAAAGAAAAA CAAAAAAAAG GGGTTTTGGC AGGGTTCCCA 
    AATTTACCTG GGGGAAAATT TTAAAAAACA AAGAATTTTT TAGGCCACTT 
    TTTTCCCCCC CCATCCACAA AACCCAAAAA AAAAGGGTAG TAAAAAAAAA 
    AAAAAAATTT GGGGGAAATT TTGGATGGTT CCTTGGCAAA GGGAAAAAAA 
    AGGGACCCCT GGTGGTGAAT CAAAAACCAA CTAAAAGGCC TTTTTGGGGG 
    GGCCCTCGGC CCGGGAAAAA ACCC

AT1G27190.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G69990.1); Has 109141 Blast hits to 65135 proteins in 2350 species: Archae - 52; Bacteria - 7607; Metazoa - 18517; Fungi - 2536; Plants - 71890; Viruses - 144; Other Eukaryotes - 8395 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66550.1

Model type
Protein coding
Short Description
Maf-like protein
Computational Description
Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G42770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR