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ET14063

CSHL Arabidopsis genetrap mutant lines

Original: ET14063

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14063

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9684332 [Map]; Strand: c
      • AT2G22770.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -393; Region: promoter
    Flanking Genome Sequence: ET14063 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTAA 
    GGGTATGATT CTGTCTGAAA CTATCTTCAA GAAGACGTGA CTGTTCTCTG 
    GTTAAACGGA GTTTCTTTCG CGGAGGAGTA GAGCCATCAT GACTAAATTC 
    TTCATCGTCT CCGTCTTCAG ATGACGGCAA TCGATTCATC TCACTCGACC 
    AAAGGNNNNN NGGACCGNTA ATTTACTAAA ATTTATTATT GATAAACCTA 
    CCGGATCGGG TAAACGGATA TGCGATTCGT CAGCCACATT CATATAACAA 
    TTATAAATAG TATTATTTTT TAACCCATAT GCTCTTTTTC CATGCAAATA 
    TTAATTATAT ACTGCAAAAT AATGATTATA AAAAACAAAA TTATATAGAT 
    CCACTATAAA GAGTTCACTC GACCACATTC ACATAACAAA ACAAAATCAT 
    ACATACTCCA GAACAAAGGA AAATTTAAAA TATATCTCCT TATATACTCC 
    TAAAGTTTTC TTTCCTTTAG CTTCTTGTTT AGTTTTATTC TTTCAACATT 
    AACTT

AT2G22770.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary
regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.
Computational Description
NAI1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 3457 Blast hits to 3451 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 69; Plants - 3252; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR