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ET14080

CSHL Arabidopsis genetrap mutant lines

Original: ET14080

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14080

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14852678 [Map]; Strand: c
      • AT4G30350.1 - [+] show detail - Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases super...
        Distance: 1535; Region: intergenic
      • AT4G30360.1 - [+] show detail - cyclic nucleotide-gated channel 17
        Distance: 2133; Region: intergenic
    Flanking Genome Sequence: ET14080 - 3-prime edge 
    ACCATAAACG ACTACGACAT TTGGTCTAGT GATCTATACT ATACATGACG 
    CCATGGCTTT TCAAGTTCAA TTTAGACTGC TAGATCGAAT TTAAATTACA 
    TTGATTCGAT CGGTACATCT TCAAGTTAAT CATATGTCAT CACGAATTAT 
    TTTTTACCCT TTTTCAGTGT AGCGAGTTTC TTTAATAGCT AATATGATAG 
    GAGTATTCAC ATTCTCTTTC ATATATATAA GTGGATTCAT CTCTCTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14852473 [Map]; Strand: c
      • AT4G30350.1 - [+] show detail - Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases super...
        Distance: 1330; Region: intergenic
      • AT4G30360.1 - [+] show detail - cyclic nucleotide-gated channel 17
        Distance: 2338; Region: intergenic
    Flanking Genome Sequence: ET14080 - 5-prime edge 
    TAAATGATAA ATTCAAAGTA TGACCCCAAG AGCACAAAAG GAGTGATCAC 
    TACGTGTGGT CCGATCGCTT TACATTTTGA ATTTTGAAAC ATGTTTTGGT 
    CAAACCGGTT TGGTGGTTTT CAACTTTGTT TTCATCTCAC TCGA

AT4G30350.1

Model type
Protein coding
Short Description
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Computational Description
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 16030 Blast hits to 14793 proteins in 2754 species: Archae - 27; Bacteria - 12697; Metazoa - 12; Fungi - 280; Plants - 607; Viruses - 0; Other Eukaryotes - 2407 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30360.1

Model type
Protein coding
Short Description
cyclic nucleotide-gated channel 17
Curator Summary
member of Cyclic nucleotide gated channel family
Computational Description
cyclic nucleotide-gated channel 17 (CNGC17); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3400 Blast hits to 3264 proteins in 232 species: Archae - 0; Bacteria - 47; Metazoa - 1584; Fungi - 2; Plants - 959; Viruses - 0; Other Eukaryotes - 808 (source: NCBI BLink).
Link
InterPro Scan - TAIR