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ET14085

CSHL Arabidopsis genetrap mutant lines

Original: ET14085

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14085

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16812211 [Map]; Strand: c
      • AT3G45775.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET14085 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCTCCC TATTCATACT 
    AATCGGAAAA CAATCTCGTG TTTGCTTAGC GCGAAGACAG ACATCGCATG 
    CTTTATTCAA ATTATCAAAA GAAACAGAAC TTGAAACAGA AGGAAGCAAT 
    CCTACAACTT TTGCAGAAGG ATGACCCATC CTATTATGCC ACAGCTCAAA 
    CGACTTATCG TCCCTCGTTG TGACTGCTGC TGCGATCTCC GTACTGCGAA 
    AGTGAAAGGT TCCTCCTATT CTCTTACCAG CTCCAGTCAC CATCTTCGAA 
    ACTCGGTCCT GAACCACAAG AAAACTATCA GCCATCTGAA CCACACAACT 
    GTTCTCATCC ATCAACTGTC CCACAGAAAT CAAATCAGAT TTGAAACCTT 
    CCACAAAGTA AACCGACTTC ATAACCAGAT TAGAACCAAG ACGTATTGAT 
    CCTTCTTTAA ACGAAACTTG TTCTCTTCCA TCAGCTAAAA TAATCAAGAC 
    AGGTGACATA TTTCTAACAT TTGACAGAGC ATCCATTCTG CCCGTTAAAT 
    GGTGAGAAGC ACCTGTGTCC ATAATCCAAG AGGGAAACGA TAACTTACCA 
    GTGAGTTTCT

AT3G45775.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 9.5e-189 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)
Link
InterPro Scan - TAIR