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ET14088

CSHL Arabidopsis genetrap mutant lines

Original: ET14088

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14088

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16877061 [Map]; Strand: w
      • AT4G35550.1 - [+] show detail - WUSCHEL related homeobox 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14088 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACGT 
    GAAGGTGATG ACCGATGAGC AGTATGAAAC TCTCAGGAAA CAGATTGCTA
    TTTACGGCAC CATTTGTGAG CGTCTTGTTG AGATGCATAA AACTCTCACT
    GCTCAACAAG ATCTTGCAGG TTTCTATCCT TTCTTCTATC ATTTAGTTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16877113 [Map]; Strand: w
      • AT4G35550.1 - [+] show detail - WUSCHEL related homeobox 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14088 - 5-prime edge
    CATCCTACTT TCTCCCTGCC TTCAGTACAT TCCTCCTCCG GCGCCGGAGC 
    CGCCATTAAC GTCGATCCCT TGAAGATTAG AAGAGTGATG GTTATTGGGT
    TGTAGCTGAT TATCCCATTC CATCATCTCT TTTGTCAGAA TTTCGCTCAG
    AAGATTTCTC TCTTTCTCTG TGTGAACGAA GGAAACAGAG CAAAGTCTGT
    GCTTTTTCGG GAGTAGAAAG AAAGGTAAAG GCAGAAAAGG ACAAAAAAAA
    CTTAGTTTAG GTTATTCTT

AT4G35550.1

Model type
Protein coding
Short Description
WUSCHEL related homeobox 13
Curator Summary
Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.
Computational Description
WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR