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ET14098

CSHL Arabidopsis genetrap mutant lines

Original: ET14098

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14098

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7951226 [Map]; Strand: w
      • AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
        Distance: 323; Region: intergenic
      • AT4G13680.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 265; Region: intergenic
    Flanking Genome Sequence: ET14098 - 5-prime edge 
    ATAGTATTAG ATTAATTATT TCCATAACTA TACATATGAA TATGATAACA 
    AATATAATTC AATATATCAA TCAGTTATCA GAACTGTTGC TAGTGAGCTT 
    TGTTCGGAAC ATGAATAATG TGAAATGTCT TTTAATTTGC CCTATAAACC 
    TGGTAAGACT TATTCTTTAT TATGAGTCTT CTTTCAATTC CTTTGATTAA 
    GGAAGCTGGT AATGGAGCGG TTCAGTGAAA GAAGCAATCA ATCATAAAAG 
    ATCAAAGTGA CAGAGAGGTT GACGTTACTC AAAATCGGGG GTTTCTTCTT 
    GGAGAAAACA GATGGGAAGA TCCCTCCAGG CTCATTGGTT ATTTGAAAGT 
    TAAGAAGAAA AGCTAGTATT CGTTCTTAGC AAACTGAGAC TGCTAATAGA 
    AACCAACCTT ATAGCAAAAG GTTGGATCTT TTAATCCAAC ATGTTCATCG 
    TCCCAACATA ATCGATGTTT AAAAGGTTTA AAAGAAAAGA CAAGACTCTA 
    AGACTCTTAA CTCAATTCCC ATTTGAGATG GAATAGTGAT TGACTCTAAC 
    AATCCCACTT TTGCTTAGCC AGCTTGAAAT ATCTGTCTTC GTTGACATCA 
    ACGATTTTGA CGAAGTTAGG TCGACCCAGG CTGAGAGAGG AGCTCGAAGG 
    GAAACAGAAA GCTTCAGAAT TTGTGAGAAA AATGCTTTGA TCTCCGACGT 
    CTTGAGTGTA AACAGCGTTT CCTTCTTCGT CTAGCCTGAA CACCATTATT 
    GCTTCTGTTT TCTTTCTCGG AATACTTTGT CGATCTCTGC CGTCTTCATG 
    TACAACTTA

AT4G13670.1

Model type
Protein coding
Short Description
plastid transcriptionally active 5
Computational Description
plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G13680.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G55270.1); Has 197 Blast hits to 193 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR