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ET14100

CSHL Arabidopsis genetrap mutant lines

Original: ET14100

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14100

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 43919 [Map]; Strand: c
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -722; Region: promoter
    Flanking Genome Sequence: ET14100 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACACAT 
    TATACGATCA AAGAAATTGA TTAGATTCAT AATATCAGAT TTTTTACACA
    AACATTAGTA GAACTACCAC CAGTATTTTT TCATTTTTTT TATCAACTAG
    ACATATATTA AAAGATAACT ATATGATTGA CTGTCTAATT GGGAGGAGAT
    GAGTTTACAA AAGTAACTTT AGAAAACAAG AAACGAGAGA AACGACCTAA
    ACAATCCGTC TTAAAATTCC ATAAATAAAA AACATAAGAA ATCAAGAAAA
    AGAAAAATAA AGAAGAGAAC ATTCCAAACT AGTTTAGTAG GTTGGAGAAA
    GCTGCCACCA AAAAAAATTT AATCTGACAA AACTATTTTT TTGAATATAT
    ATTAGTTATT GTGAAAATAA AAACGTGATG ACATCATAGT GACATGGGCC
    TGCATGAACA ATTTAATCAG ATATGTTTTT TTTACCGCAA TCAGATATGT
    TATTACATAC ATATCAATAT TACTTCATTT TATCTTAAAT TATATAGCTC
    ATGTTTAATT CTGGAATTGT TTTCATAACT AAATTTTTTT CGATAAAGTT
    GTCATTTTAA AATATTTCCT AGAGTTCTAA T

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR