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ET14107

CSHL Arabidopsis genetrap mutant lines

Original: ET14107

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14107

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163722 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -232; Region: promoter
    Flanking Genome Sequence: ET14107 - 3-prime edge 
    TCTACAAGCT ATACTTAATA GTTGCATGTG ATGCACACGA GTACCATCTT 
    GTTGAAATAG TGGTAGTACA ATTTAAGAGA AATCCAAATA CTAATTAAAA 
    AAGCCATCAT GATTAAAATA ATTAGGCTTG AAATCGTACG TAGTCAAAAG 
    GTTTGTCCAT TAATTAAGAA ATTAATAAAA ATGGACCATC ATTTCCACGT 
    ATCTACAAAT CTCTCTTACC CCCATATGCA CATGTCTGCG AACCCCATCA 
    TTTAAAGCCC CAACGTAGCA ACCTCACCGC CTTCAATCAT CAAACATCCA 
    AACTCTATCC TTTCGTTTCT TGCCCACAAC GACAACTAAT ACTAGATGGG 
    TAACAGTTTA GGCGGCAAGA AAACGACCAA AGTCATGAAG ATAGACGGCG 
    AGACTTTTAA ACTGAAAACT CCGGTGACGG CAGAGGAGGT CTTGAAAGAC 
    TTTCCCGGCC ACGTCTTGTT AGACTCCGAA TCTGTCAAGC ACTACGGTGC 
    CCGAGCCAAA CCACTTGAGG TATGTTTTGT TTTTTTCTAT CAAAACTATA 
    TGTTATGTTT CTTGTTAAAC TACACGAATC ATGTTTTGAT AGACAAAGCG 
    TTTAATGTTG TTTGGTGTGT AGACGAAGCA GAGGTTGGAG GCGAAGCGGC 
    TTTATTTTGT GGTGGAGCCG GTGAAAGAGT GTCCACCGAG AAGGGTAAGA 
    TCAGGAAATC ACGTGAGTGC AAAGGAGAGG CTTGAGAGTC TCATGCTGGC 
    CCGGAGATCG TCTTCCGATC TCTCCATACT CAAAC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET14107 - 5-prime edge 
    AAAAAAAAAA AAAAAAAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163602 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -352; Region: promoter
    Flanking Genome Sequence: ET14107 - 5-prime edge 
    CCTACTTTCT CCCTGTTCAA GAGTATATCA CCTTGTTATT CAATTACCTT 
    CATCTCACTC GACAGAGAAT TTTAGAATTA GGGTTTGGAT GGTTATGATG 
    GTTAAGGCGG ACAAAATCGT CAATGGATCA AACCTTTTTT TATTTACCAT 
    TCATCAATTA TAGTACGCAG TGGTCCGGAT AAAAAATAAT AGAAGAAAAC 
    CGCAACGGAC CATCTACGGA CCGTTTTTAC ATACAAATAA ACTTGATCCG 
    CAGCGATTTA TTGTCCACCC AAAAATGAAG TAGACTAAAT AGCAGACAAA 
    TTAAACCGTT TTGTCTGCTG CATCCATTCA AAATCTTAGA CTCGCTAAAA 
    TATGAACAAG ACAAAATAAT AAAGCGGAGG TAAGAAAGAA AAATATGCCA 
    TAAACTCCAA AATTGTATTT TACAAATACC TAACGTTCTT TAGATTATAT 
    CGAGGGTCGC TAGTATTTAA AAGGAAAATA ATAGTGATAA AAGTGCTAAC 
    TTTTGTGGGA AATGGATTCT AGGTTGAAAA AAACAGGACT TTTGTAAGCA 
    ATTTTCAACT TAACAACATC ATGCGGATGC GCGGTACAAG TC

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR