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ET14108

CSHL Arabidopsis genetrap mutant lines

Original: ET14108

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14108

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16494525 [Map]; Strand: w
      • AT3G45090.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron1 (5UTR)
      • AT3G45090.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: ET14108 - 3-prime edge
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATGTTA 
    CCGATTGATC TGCATTCCCG ATCGTTTGAA TTTTCTCTGA AAATTTTGTG
    AGATTTGTTT TTGTTTTGTA TAGAGATGAT GACGGAGGCG ACGAAGGTGT
    TGTATATAGT GGTGCGTGAA GAAGGTGATG ATGATGATAA TAATGGAGAT
    GATTCGTTTA GGTATACGCG TCCTGTTTTG CAGAGTACTC TTCAGCTTAT
    GGGTTGCAAA GCTCGTCACG CCTTCAAGGT GTTATTTCGA TTTTGTCTCA
    TTGAATGTTG TTTCTGATTT TAGTTTTGAT GGATCAATCT TATGAAGAGA
    CTTTTTTTGT ATTGGTTAGA TCAATGATGT GTTTGGATCT TGAAAGGACT
    AAACTTGATC TTACATAGTT TGGAAATTTG GAAATTTTGT TATACTAGTA
    TTGAGCTTTC TGCTGTGAGA GTTAGTTAAT GCACGTCTTT ATCAATGTCT
    CTAATAGTCT TTTTAGGATT TGGTTAAGGA CAAGACTTTT CTTAAACTCG
    TAGTATATTT CAAGATTGGT GTGGTTTGTG CTCAGTCCTG TTACTTTTCT
    CTGCAAGCCT GATATAGTTA TTATGTAAAA TCTTTTGGTT GCCCTGGCAT
    GAATTGT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16494586 [Map]; Strand: w
      • AT3G45090.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G45090.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET14108 - 5-prime edge
    ACTTTCTCCC TGGGTAAATA CCGGAGAAGA GAAAATCGGA GATCGGAGAA 
    GTTAGAGAGA AAGAGAAAAA CTGTTGGAAA AATTTAGGGT TTATAATGAG
    GATCGTGATA AGAAGAAGAA GAATAAGAAG AGAGGAAAGA TATTTTCGCC
    ATTGTTGTTG GTCACTCGCC TTTCTTCAAC GCATCGCTCG AAGAGAGCCT
    TCACGACTTC TTAAAAGATA CCTTCTTCAT CCTCACTCGA C

AT3G45090.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60760.1); Has 12357 Blast hits to 4786 proteins in 479 species: Archae - 104; Bacteria - 5921; Metazoa - 2136; Fungi - 801; Plants - 320; Viruses - 126; Other Eukaryotes - 2949 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G45090.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR