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ET14116

CSHL Arabidopsis genetrap mutant lines

Original: ET14116

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14116

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9449516 [Map]; Strand: w
      • AT1G27190.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -691; Region: promoter
    Flanking Genome Sequence: ET14116 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACT GACCGTTTTC ATCCCTAGTT 
    TCGAGTTAGA ATCTCAGATG AAATGTTTAA ATATTACAAA CGGTTGGTCT 
    CGAGGCAATG AAGATTATGG GCCTAAAGTC ATGAAACCCA TGAGCTGAAA 
    TGTAAGTTAA TGCTGTGAAA GCCCATGGGC CAAAACACAT TTTTGTTCAA 
    GTAATGTCTT TTTTTTTTTC CCCCATTCCA GAAAAAAAGG CTTCCGGTTT 
    AAAAAAAAAA AAAATTTTTG GCTTTTTTTT TTAAAAAAGG TCAAAAACCT 
    TGGGGCCTTT TTTTTTTAGG TTTTTACCCG CCAACCAACC TTTTATTAAA 
    AAAAAATCCC CTTTAAGGCC CCTTTTTTCC ATTTCCATGG GGGAAAAATT 
    TAATTTTGAA TAAATTGGAC CCTTAAAGTT AAAAAAACCG GGGTCCAAAA 
    ATCCCGGGCC GATTTTGGGG AAACCCTTCC TTTCCAGGAA TGGAAAAAAA 
    ATCTTCCCCC CAAAAGGGTT TCCTTTTTGA AAAAATAACT TTCCCTTTCC 
    ATTGGAACCT GGGGGAGGAA ACCAACCCGG CCTGGAAAAA ACCCCGGGTT 
    TCCCCAAAAT TGGTTTTCCA ACGGGGGTCT TTTTGAAAAA AAATCTTTTT 
    CCCCCAACAA AAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9449570 [Map]; Strand: w
      • AT1G27190.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -745; Region: promoter
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET14116 - 5-prime edge 
    TCCTACTTTA TCCCTGCTCG AACCTAAGTA CTACTACTAC AAATTTCGTT 
    CTTGAAATCT TTCACTTCCA TTCATATAAG AACAAGAAAG AAAAACAAAA 
    AAAAAGGGAT TTAGCAGTGT TACCGAAATT TACATGTGGT AAACTCTAAG 
    AAACAAAAGA TATTATAAGC CAACTTTATC CCCCACCAAT CAACAAAACC 
    AAAAAAAAAT TGTAGGTAAC AAAAAAAAAA AATTTGGGGG AAAATTTGGA 
    AGGTTCCCTG GCAAAAGGAA AAAAAAAGGA ACCCCGGCGG TGAAATCAAA 
    AACCAACTAA AAGTCTTTCT GGTGGTGGCC CCGGCCCCGG AAAAAAACCG 
    GCCCTTGGTT CAGAAAAATT CGACATACCC AAATCTTTAA ATCCAGGGCC 
    CCACATTTCA AAAAAC

AT1G27190.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G69990.1); Has 109141 Blast hits to 65135 proteins in 2350 species: Archae - 52; Bacteria - 7607; Metazoa - 18517; Fungi - 2536; Plants - 71890; Viruses - 144; Other Eukaryotes - 8395 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR