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ET14120

CSHL Arabidopsis genetrap mutant lines

Original: ET14120

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14120

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7128872 [Map]; Strand: c
      • AT4G11845.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: -769; Region: promoter
    Flanking Genome Sequence: ET14120 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTG 
    GAAGGTGAGA AGTCTTCTAA GATCACTAGT GATCCTTATG TTACTGTCTC 
    TATCCCTGGT GCTGTAGTTT GCTCAAATCT TTTTTTTCGG AGATTGGATA 
    GCTTTGTGAT GCATGATCTT ATGAATGATT TGGCATAAGC TCTTTCAGAA 
    GAATTTTGTT TCAGACTGGA AGATGACAAC ACTACGGAGA TACCAAGCAC 
    AACTCGATAT TTTTCATTTC CTAGAAGCCA ATGTGATATT GTAATCATAT 
    ACTAGTACTA AAGATATGAC AACATTACTA AATTAAATCA TATAGAAAAA 
    ATCCAAAGCA CACACTTTGA TATATCAATT GAAAGAATAG ATTTACAGCT 
    CATAAATTTG AAAAGCACAA CTAGGACCTA AAGGCACACT TTCAATCAGA 
    TCACACATAG AGATTTCTTG AACTGGAAGA AATAAAGAAC AAATGTTGAT 
    CACTACAAGC CTACAAGGTA AGTTTCATAT G

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET14120 - 5-prime edge 
    AAAAACCCAA AAAGGCAGAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7132761 [Map]; Strand: w
      • AT4G11850.1 - [+] show detail - phospholipase D gamma 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14120 - 5-prime edge 
    CCTACTTTAT CCCTGACTTC CACTTTCTTC CGACCTAACC CAGACAACAT 
    CCCACCAAGT CTGTTATGGA AACCATCCAT GTTAGGAAGA TGTTTAGCTT 
    CCTTAACCCA AATGTCTAAG TTACCATGTA ACAATTCAAC CCTCAAAGAG 
    CCACTACTCG TAGCAAACGG CACGTATTGC TGGCCGCCCC CATGGCTTGA 
    CCCTCCTCCC ATAGACATAG TCTCAGTATA AGCCGGATGA TACGCCATGA 
    AAAACGAAAT CAAAAACCCA AAAAGTCAGA AACTTTCAGC TGTTAGATCA 
    AATCTCAAGC ATAACCCAGT TCAGTGAGAC AAAAGATCGA TCACTTGGTG 
    GGCAATAATC GAGAGATCAA GACTGAAGAG TGAAAAAAAA A

AT4G11845.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G11850.1

Model type
Protein coding
Short Description
phospholipase D gamma 1
Curator Summary
phospholipase D (gamma)
Computational Description
phospholipase D gamma 1 (PLDGAMMA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: defense response to bacterium, incompatible interaction, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D gamma 3 (TAIR:AT4G11840.1); Has 2106 Blast hits to 1666 proteins in 402 species: Archae - 0; Bacteria - 529; Metazoa - 440; Fungi - 441; Plants - 536; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR