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ET14121

CSHL Arabidopsis genetrap mutant lines

Original: ET14121

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14121

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7849818 [Map]; Strand: c
      • AT4G13494.1 - [+] show detail - MIR863a; miRNA
        Distance: 2919; Region: intergenic
      • AT4G13500.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 6949; Region: intergenic
    Flanking Genome Sequence: ET14121 - 5-prime edge
    CCACTTTCTC CCTGTTCACA TCATATTGTC TCATGAGAAT ATTACATATT 
    GCCTTTGAAC TTGGCCAAAA ACTTTCTTTT TCCTTCCACA TCTAGGTTCA
    CGTAAGTGTT TTTTACAATG ATACAATAAC ATAACTTCAA TACTTCATAA
    ACTAAACATA AGTTAAATAC TTCAGTTTAA TATTAAAAAC CATGGGCAGT
    CCATGGTTTT AAGACCCAAA TGACAACTCT ACGTCAAAGT TCTTTAACAT
    CAATAATCTT AAGATCAACA AGTTCCAATT GAACATTAAA CCCTTAAAAG
    CATCAGAGAA TTAAACCAAT AGGAGGTGAA AGAGAAAGAC AAAAGCAAAA
    AAGGAGAAAA AGACTTATAT AAATTGGAGC CATTGAAGGG AAAGACCAAT
    TCCTCTTTAA TTTCTCAAGA ACCAACGACA AAGACAAAAT AAAACAAATA
    GATTTATTTA CAATCTTTCA GCCTTTCAGG TGATAGACTA ACATATATAA
    ATCAATAACC TTCATGGAAG TTATAATTTT GATTATCAAA AAGATATCTG
    CCTCTTGACA ACTGTGAAGT AGGTGAGGAG GTAAAAGATA GATAAGTTGT
    GACCCTAACC TTTGAAGAAA CAAACACAAG TCTTAGTGGC CAACTTTTCT
    AATGGTAGAT TGCAAGTTGT GCTGATTTAT CTCTAGGCT

AT4G13494.1

Model type
miRNA
Short Description
MIR863a; miRNA
Curator Summary
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UUGAGAGCAACAAGACAUAAU
Link
InterPro Scan - TAIR

AT4G13500.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR