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ET14137

CSHL Arabidopsis genetrap mutant lines

Original: ET14137

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14137

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 346973 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -564; Region: promoter
    Flanking Genome Sequence: ET14137 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCTT CCGTTTTCAT CCCTACATAG 
    GAGATAACTA CGTATCGGAG TAAATATAGA GAAACAGAAG ATTGACATAT 
    ATCCTAAATC TAATACTATT TAACCTTCTA TAAAGTTATT TTCATGAATA 
    CACCATATGG CCAACACGAA CACATATTCA GAAATCACAT TGAGCAAAAT 
    CGTCAATTCA CGCAAACCCA CACGAAAGAC ATGTCGCAAC AATCAGCCAA 
    TGTCACGTGG TCACAAACCA AATTAAACCG AACCAAACCC TCTTTAACCG 
    GAACTCCCAC TCTTGCAATA AAATAACAAA ACCAATGAAC CAAAATCGCC 
    GCCGAAAGGG CAAAAATCGT TAATAAACAA ACCACACGGA AGAAGATGAG 
    TCCCGTCACA ATCAAATCAG GCCAATCTCA CGTTATCCCA AACCAAAACC 
    AAGTAAACCG GAAATTCCAC TCTTTCTTTT AACAACAACA AACCAAAAAA 
    CACGATCGCC GCCACAAGGG CAAAACCGTC AATTCACAAG TAGATCCTGT 
    CACGTGATCC CAATGATAAA ACCAATCCTC TCTCTCTCTC TCTCTTTTCT 
    CGGAGGCCTT TTTCAGTCAT GGCGATAACC GCATACGACG CTCTCACGGA 
    GAGACAAAAA GCCCCCAAAG TCCTCCTTAT TAACGATTTT GCCATCTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 346917 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -620; Region: promoter
    Flanking Genome Sequence: ET14137 - 5-prime edge 
    CCTACTTTCT CCCTGCTCCT ATGAGGCAAC TGCTGTTGTA TAAATACCTC 
    TCAAATTCTC AAATTCTACT CCGATACTAA AAACTTGAAT GGTAATCGTT 
    TTCGTATATG GGAGTAACAA ATCAAGGGAA ACCAAAGAGA AGCTAATGTT 
    GGATTATGGA GAAAATCAAA TCATTATCTT CTGATCTGTC TGCTCACATA 
    AAGATAAACA AGGATATGTA TAATGTGAAA TCTATTTCGT TGTCCGCGCA 
    TAATATCGGG AAGGTTTAGA ATGTTATATC ATTAGCAAAT TCCCAATGTT 
    CACACAGTTA CAAAATAGTT ACAGTTTGCT AAATGTCATC TTCATCTNNC 
    CCCCTTTCGA TTAACTAATA AGAATACAAA AAAAATATAT AAGAAACTAA 
    TCTGGTGTTT TAAAATTTGA TTAAGCTTTT AAGTACTTCC AAAACTTATC 
    AACTAATTTG GTTTTTGA

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR