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ET14148

CSHL Arabidopsis genetrap mutant lines

Original: ET14148

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14148

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3436008 [Map]; Strand: w
      • AT3G10970.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G10970.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G10970.3 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14148 - 5-prime edge
    TCCTACTTTC TCCCTGAGAC TAAGGATACT AATACAAACC TGAAAGCTGA 
    GATTCGAGGA GAAATTAGAG TGAGGAAAGC GAAAAGATGG TTCGGAAGAG
    ATAAGCAGAG ACGAAGGACG AGTACTGCAT GAGCAGTCCA TGATTTATTT
    GATTAGGGTT TCTTCGGAAT CAGAAACTGA GAAGATGATT GAACAAAAGC
    ATTCGTTTTT GTTCGAAGTT TATTGAATGA TTTTAGGGTT CGCAGACGGA
    ACTATCTAAA AGGCTTTGTT CTGGTTCATA CGTTTGGAGC CCGAGAACGT
    ATTGAGAGAG AGAGAAGGTG AAAGAGAGCA AGCTGAAATT GTTATCCAGT
    GGATCACGCC ATTAATGCCG TTTTACGTTC TTAGTATGAG ACGTTACGTC
    GTTTTATTGA AGTGAAAACA CCAGGAAGTC TGCATCTGAC ACAAATACTA
    ACGCTTAAAG TAAAAACTTT CGGATCAGTG AATTATGGAC TTTGTTGGAA
    TGTTGGGTAT ATACAAATAG GAACGTTAAT GGGCCAGTGA AATAAACTTT
    A

AT3G10970.1

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 4274 Blast hits to 4272 proteins in 1370 species: Archae - 31; Bacteria - 3851; Metazoa - 11; Fungi - 7; Plants - 184; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10970.2

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10970.3

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 3249 Blast hits to 3249 proteins in 1169 species: Archae - 14; Bacteria - 2940; Metazoa - 3; Fungi - 1; Plants - 144; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
Link
InterPro Scan - TAIR