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ET14154

CSHL Arabidopsis genetrap mutant lines

Original: ET14154

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14154

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5957482 [Map]; Strand: c
      • AT1G17380.1 - [+] show detail - jasmonate-zim-domain protein 5
        Distance: -270; Region: promoter
    Flanking Genome Sequence: ET14154 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTAAAG AACTATATCT 
    AGTGTGAAGA AAGGAATTTT CATCCATGAT TAATAGTAAG AAAATTAATG 
    TTAATAATCC ATCATTGTGC AAGTAATTTA TCTATTGTTT TATGAGTTGG 
    TACAACAAAT TTATTGCCCT GTCTTATCAT AAAAATATGT TCACCTCTTG 
    TTTCTTGTTT GGCACAGATT AGTTGTCTAC CATCAACGGC CAGATTTCAA 
    AATTGGACTA ATTTTTTATA TATATTTTCT GTTAGAATTT ACCGCACGTT 
    TTCCTTACGC GTAACGATAA AAGAGAAAAA GAATAAAGAT TTCAGAACCG 
    ACGGCAAACG TTATTAAACG GCGTATGTCA CAAATTCGTA AAAGACTCGA 
    AATTTGATCG TATTTACAAA ATTTGCCCTT CCACAAGAGC ACATTACCAA 
    CTCCAGTGAT GGCATCATCG TAATAGAAAC AACTTTCATG GCCTTTTTTG 
    ACATCACCGC GACGTTCCTC ACGTTAGTTA ACAAACTTAA CGGCGGTGCG 
    AATTGAATAG TAAGTGGACC AATGTGGGAT CCTACCATCA AACCCCTACG 
    AAGTTTCATG TGCCATAAAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5957416 [Map]; Strand: c
      • AT1G17380.1 - [+] show detail - jasmonate-zim-domain protein 5
        Distance: -204; Region: promoter
    Flanking Genome Sequence: ET14154 - 5-prime edge 
    ATCCTACTTT CTCTCTGTCG ACGACTAGTT AAAAATGCAT GCGATGGAAT 
    ATTACTAAAT ATGATATAAT CTCATGGCTT TATGTAAGAT TTGTTTTTTG 
    GTTTTTTTGG TTGTTGTTAA TAAATTTATT ATTGAGAAGT TTAATTCTAT 
    TTTGGTCACA ATATATTGAA ATATTTTTAA GAAACTAAAA ATTCCTATTT 
    ATTTTTGTTT TCATTAATTT ATGAGAGGCT ATTAAAGTCA CAGAAACTTA 
    TTGGGTGAAT GAGTTTATAA ACACATGAGC TATTGAGCTA GTAGCCTCTT 
    GTACTCTTCC ATTTTACGCG CAATCCACGC ACCAACAAAA AGAAAAGAAA 
    AGAAGAGATA AAGAATATCT TTAAAAAGTA AGTGTGGAGA ATTCTTTCTT 
    CTCAATAAAC AACAACATGT CGTCGAGCAA TGAAAATGCT AAGGCACAAG 
    CGCCGGAGAA ATCTGACTTT ACCCGGAGAT GTAGTTTGCT CAGCCGTTAC 
    TTGAAGGAGA AGGGTAGTTT CGGAAACATT GATCTTGGCT TATACCGAAA 
    ACCCGATTCC AGTCTCGCGT TGCCCGGAAA ATTCGATCCA CCAGGTACTT 
    TTATTATCTC TTT

AT1G17380.1

Model type
Protein coding
Short Description
jasmonate-zim-domain protein 5
Computational Description
jasmonate-zim-domain protein 5 (JAZ5); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 6 (TAIR:AT1G72450.1); Has 301 Blast hits to 296 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR