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ET14169

CSHL Arabidopsis genetrap mutant lines

Original: ET14169

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14169

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 45082 [Map]; Strand: w
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -1885; Region: intergenic
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 193; Region: intergenic
    Flanking Genome Sequence: ET14169 - 5-prime edge 
    TGTCTCCATT TTTAGTGCTC ATTATTTTGA CCTAATTTTC TTCTCTCTCT 
    CCTCTTTTGA CAACTCCTAT ACACCAAAAT AGGCAATTTA ACATCATTGT 
    TCTTCTATTT CTTGTCTTTC TTCTAAACCC CACGGATTCT TCGACATTTT 
    CTTACAAGCC CTTTCAACGG CCTTGATTTG ATCTTATCTA GGAAATATGA 
    GCTGGATACG ATAAATGACT TCTTCAACGT TCTCTATATG ATTTTTGGAG 
    TCAATTACTA GTTCTTAAGA TGTTTTATTT GACGATTTAA CAGGATCTCT 
    CCCCCATAAC TCATTACACG AAGTGGGGAC GGCTTCTTTC GACATTAAAG 
    AATTGCCCAT TGTTTAAATT CTCAAGTGGA TAAGTAAACT TATAATCACC 
    ACTAATTATA TATATAAGTA TATTACTAAT TAATCGGTCT AATTAAGATA 
    CCGACTAAAT GTCGTTGTCC ACATGAAATT TCTATATGTT GCGTCATGNA 
    TCCCCTCGGA CGATTCTTCT AACACTGAAC TTGCAACTAT GCCAATTTTA 
    CCTAATCGCC CTCCAAAAAT TTTGTAAACT TAAAAGAAGA ATTACACAAT 
    TTGGTTTTGC AGTCAAACAG TAATCAGTCT TTATGAGAGG AAATATAGAT 
    TTAAGAGGAT GTTTTCACGT TGCTCACATA CATATATGAT ATGATCGTGA 
    CTCGTGACTG TCTTTCTTTC TCAGAGACAA AACAAAAAAG GGAAAAAAAA 
    AACAAA

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00124.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR