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ET14173

CSHL Arabidopsis genetrap mutant lines

Original: ET14173

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14173

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2341099 [Map]; Strand: w
      • AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: ET14173 - 5-prime edge 
    ATTTCCATCC TACTTTCTCC CTGATTATAG AAATGAATTC GCATATGGTG 
    TGGTCCAATT CAAATTTCTT GTTATGTACA CCCATCAATC CTTTTCTTAC 
    TTTCTATCCT CGAGACCTTT AAAACGCCAA TATTTTTGTA AAAATGCATA 
    TAGTGGTTGA TCAAAGTTCA GCTTTCATGT GCGATGGTAC TTGGTTTGAT 
    GAACCTGCAT ATATAATAGT ACAATTTATA CATATCATAT CTAAACGGTC 
    CTGCCTATAT AATGAGAAAT GGAAAGAAAA AATATGATTT AAATATTCTT 
    ACCTTGGTTC

AT3G07340.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Link
InterPro Scan - TAIR