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ET14174

CSHL Arabidopsis genetrap mutant lines

Original: ET14174

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14174

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22223555 [Map]; Strand: w
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: 43; Region: intergenic
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 248; Region: intergenic
    Flanking Genome Sequence: ET14174 - 3-prime edge 
    TTGGAGAACT ATCCATGTAA CCAATGGAAT AAAGCAGGAA TCTATTGGTA 
    ATGCACGAAT TAAACAAGTA CGAAAATGGG ATCTCGAGGG AAGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 416730 [Map]; Strand: c
      • AT2G01910.1 - [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
        Distance: -181; Region: promoter
      • AT2G01910.2 - [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
        Distance: -697; Region: promoter
    Flanking Genome Sequence: ET14174 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCTTCA CGCGACATTA 
    CCGGCAACGC GCTTATCGTC TGGCACACTC ACCCGCACCG TACCCGTCGT 
    CGGTCTTTTC GCCAATTTAT CGTATTTTTC CGTGAAAGAG AATAATATAA 
    TACAACGTTA CTATTTACAA CGATTTTAAA AGAAGCTCAT TATTATTTCT 
    TCTGTAACTC TCTTCTCTGT TGCTGCTACC TGT

AT2G01910.1

Model type
Protein coding
Short Description
Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary
Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
Computational Description
ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 5922 Blast hits to 4912 proteins in 547 species: Archae - 118; Bacteria - 527; Metazoa - 2917; Fungi - 542; Plants - 628; Viruses - 11; Other Eukaryotes - 1179 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01910.2

Model type
Protein coding
Short Description
Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary
Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
Computational Description
ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60150.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF498/DUF598)
Computational Description
Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT2G44525.1); Has 753 Blast hits to 753 proteins in 341 species: Archae - 0; Bacteria - 405; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR