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ET14191

CSHL Arabidopsis genetrap mutant lines

Original: ET14191

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14191

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30377659 [Map]; Strand: w
      • AT1G80831.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1178; Region: intergenic
      • AT1G80840.1 - [+] show detail - WRKY DNA-binding protein 40
        Distance: -6032; Region: intergenic
    Flanking Genome Sequence: ET14191 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    TCGAAATTGT GGTAGAAGAC TTGAGTACCT TAGTAGAATA TATAATGTGC 
    TGTTTTTTTC TTCTTGATAA ATAATGGCCG TAGATTGTGG AGGTCAAATT 
    AATCAAACAT TGGCATATTC TCAATGCTTC GGTTTTTGGG ATAATATTAA 
    GTGCAATCAA TGGCTCATAT CTTAGATCGT ACGGCTTAAA GGTAATAAAA 
    GCATCTCATG AGTCAACTAA ATAAACAGTG AAAACAACTT TATTCTTTCC 
    ATCTTCAAAA TAAACATTCC TATTCTTACG TAAAGCTATA GTAGTGTTCT 
    TTAGCACCGG CTCAAACAAT CAAGAAGCCT TAGGACGACT TACAAAAAGG 
    GGTCTTTTCA AACATGCTAA AACAAAAACC ATTTCATATA ATCATGTCTT 
    AAGCTTCATT ACAAAAAGGG ATTTTTACAA ATTCAGGAAT TAATTTTGTG 
    TGACAGTTAG AGGAGAGAGA TTAGTAAAGC AAAAAGTACT ATTTATTTTC 
    TTAGTTCTTT TTTCTCCGAA AAAGAAAAAC TAAGTATAAA AATTCTATCA 
    CACATAAAAC TGTAAAAGAT TTTTACCAAA AAAAATAATT TGAGCATTTT 
    ATTTTCTTGG GCTG

AT1G80831.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80840.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 40
Curator Summary
Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.
Computational Description
WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR