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ET14203

CSHL Arabidopsis genetrap mutant lines

Original: ET14203

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14203

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 112032 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -1314; Region: intergenic
      • AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 673; Region: intergenic
    Flanking Genome Sequence: ET14203 - 5-prime edge
    CTTTCTCCCT GGTTATACAT AACATTATTG ATATTTAACC ATTCAACGTC 
    TTTTACGTGA GGAAGATATC TGTTGAAAAT CACACTTTCA CTCTCAAACT
    ACCTTTGTTA ACATTCTTTT GAGGTCAGCA CTCTCACTCT CTTGTCACTC
    TGTTTTGCTT TTGTTTTCTT TAGAGAGAAA CAAGAACACG TTTAAGAACA
    TGATGTCTTG ATAATAAAAC TTGGATGATT CTCTTACAAG ATACACACAC
    ACATACTTAT TATAGTTTTA CTTGAAACAC TTACACACAC AAGCATGCTC
    TTAAACGCAT AACTAACTCT GATTTCTTGC AAGCTACTCT ACTACATATT
    GGGACTCTAA CAACAAGCAT GCTCTTAAAC ACAATTTATG TTTCTTTTTA
    TTTCCTCACC TACTTTGCAG TTTCAAGATG CAGAATCTCT TAATAATAAC
    TTCTGCGAAA GATTGTAACT AAATGTATAT GTTTTATTTT GGTTGCATTT
    GGTATTTGAG AAAGAGGAAC TAGTGTCACC ATTTCAGAAT AATTTGCGAA
    TTGTTTCCCT CAAGGCAACA GAAACTGTTA CAATGTGTCC GCAGGGAAAA
    GGCTTCCAGT ATTTGATCAT AACC

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00250.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR