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ET14220

CSHL Arabidopsis genetrap mutant lines

Original: ET14220

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14220

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 666423 [Map]; Strand: w
      • AT4G01530.1 - [+] show detail - transposable element gene
        Distance: 1321; Region: intergenic
      • AT4G01533.1 - [+] show detail - other RNA
        Distance: 725; Region: intergenic
    Flanking Genome Sequence: ET14220 - 3-prime edge 
    GCTTTCGTTC GAAGCTCCGA CAATGAACCG TCAATAACTT GCCACGTCTT 
    CATTCTCATT CACAATAATT TTTATATTTT TCTAACAAGT TAGAGTGGTG 
    ATGTTACGTC TAGTGCAGAA AGTATAATCT GTTTCCTGTC GTCGTCCTAA 
    TGTTGACAGG AAGCCACAAC TTGAGTAAGA ATTTTCCCAA TAACTTTTAT 
    GAACTTGCCA CCTATCCAAT TAGGAACAAA AAGAGATCGA AGAAGTTATG 
    TAATTATTAC TTTCTTATAC TAATTAATTA ACCTTTTGAT TATTGGATAA 
    GTATTACTTA CAAGTGTTAA ACACGTGTCC TGCACGGGTA TGATATCAAA 
    ATTGGAGTCA GAAAAGTTGT GCATACCAAA AATGATTATA GTAAAAAAGT 
    TGATGGTTTT GAGAGTGCAT ACAAAAGCTG GATGAGACAA AAAAAAAAAA 
    AAAAAACTAA AAAAAAGGGG GGAATTTAA

AT4G01530.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26860.1); similar to 52O08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67547.1); contains domain NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED (PTHR19446:SF34); contains domain REVERSE TRANSCRIPTASES (PTHR19446)
Link
InterPro Scan - TAIR

AT4G01533.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR