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ET14232

CSHL Arabidopsis genetrap mutant lines

Original: ET14232

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14232

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 84981 [Map]; Strand: c
      • AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
        Distance: -287; Region: promoter
    Flanking Genome Sequence: ET14232 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC GTACACACAA GAGTTTACTA 
    GGAATGCGAT TGGTAGGTGA CAGATAATAA AGTGACAAGC TGTCAGATTA 
    ACAAGCCGTT TGTTTGACCT TCTCTGCCTT CTGTCTCCTT TTTGACTCCC 
    TCTGACTCTT TCTCTTATAT TGCTTTCACT TCCAAGAAAA GAATAGAGCA 
    TTTGTGATTT TAAATCATTG TGTGTTAAAT AAGAATTTAT CCGTATCTCA 
    ATTAGGATCA CGGCACATGA GAAAGCTTTT GGATCATTCA TTACGTGTCA 
    ACACATCTTT CCTTGAGTTC AAATTAAAAT TTCGAGGCCT CGAGACCACC 
    TTCACCACTA TTATATATTA ATCACCCCTG TATATTTCCA AGACAAGTGA 
    TTAACGTTAG CTTTATTACA TAATGTTTTT AGTCACACTT GAAGAAAAGG 
    CAAGTGGGTT TGGATGCAAA AGGCAAGATT TTAACATAAG CCCATTTGAG 
    GCTTTTGGGC CTTAACCTTT TGGGCCTGTA TTACCTATGA ATTACACATT 
    TAACATTTTG ATTATTGGAA CCCAACAAAA TGGAGCAAAG CCTTATAATA 
    AAATAGAGGG ACATGGGTGT CATGTCGACG TCAAGCGCGA GATGTGAGAT 
    GTGAGTTTGC ACTGCAAATC CAATAGAATC TATTAACGCC CCTTTTAAGT 
    TACAGGGCAA TCCAGTTAGT ACAAAATAAA GAGTTCCTAA TAAATGTCA

AT4G00200.1

Model type
Protein coding
Short Description
AT hook motif DNA-binding family protein
Computational Description
AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR