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ET14234

CSHL Arabidopsis genetrap mutant lines

Original: ET14234

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14234

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23075621 [Map]; Strand: w
      • AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 2432; Region: intergenic
      • AT1G62380.1 - [+] show detail - ACC oxidase 2
        Distance: -6549; Region: intergenic
    Flanking Genome Sequence: ET14234 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTGACCAATT GGTTAACCAT 
    AAATGAGAGA TGGGTTCATG AACATGGACG ACATTGTCTC AACTCTATTT
    TGGAACTTGA TGCACATGCC TTGCTCTCAT CTATTCATTA CATTCATACA
    TAGATATGTA TCTAACCTGG GTCACATCCA TGACACATCT TCTCTCAATA
    GCCACAAATA ATACAGCACT CACTTTTGAC ATATCTATAC ACTTATTACT
    TTTTTTTTAA TAAAAAGAAT TTGGTTTGAG TTAATAGAAG TATAAAAGTA
    AGTTTTCATT AAATACATAA CACAAAATAA TTTATGTGAT AGGTGATATA
    AATATAAAAA TTAAGGGGTT TTTAAGATGT AACATACTTT CTGTGAGGTA
    AAAACAAATA TATATATATT GAAATATGCA AAGCTTAAAC TATAATACTC
    TGTAAAATTA TTACATGTAT AGATACTAAA GTCTAAAGTA TATGAGATCA
    TAGTTATAAA AGACTTTTTT TCTTCTGCGT TTTTACATGT ATAATAATTA
    TTTTGACCCA AGAAAACAAC TATTTTTTAA AAAAATATCA TATAATTGTG
    AAAAAAGAAA ACATTTCAAG TTTACATTAA AAAAATAAAA ATTGTGAATG
    CTAAACGCAA TAAAGAGTTT ACAAAATTTC AAAATACCAA AAGACGTATA
    TGTTGTGGGA AAAAACATCC TCTTTTTTTT TT

AT1G62370.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 610 Blast hits to 610 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 27; Plants - 270; Viruses - 11; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62380.1

Model type
Protein coding
Short Description
ACC oxidase 2
Curator Summary
Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.
Computational Description
ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).
Link
InterPro Scan - TAIR