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ET14240

CSHL Arabidopsis genetrap mutant lines

Original: ET14240

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14240

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9105231 [Map]; Strand: c
      • AT2G21250.2 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -44; Region: promoter
      • AT2G21250.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -44; Region: promoter
    Flanking Genome Sequence: ET14240 - 3-prime edge
    TACGACGTTA CGACGTTTTC TCTGCACACG TTATATAAAG GGCCATGATT 
    CCTCACTATT TTAGGCCCAA TAAGCCAGAA CCGTTTATTT ATTAGGCACA
    GCACTACCA
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9105123 [Map]; Strand: c
      • AT2G21250.2 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G21250.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET14240 - 5-prime edge
    AAAACACACA CTGAGAAACT CTCAATCTGA GCAGATATTT ACCCAATCAG 
    GGATTCAGGA AGAGAAGCAG AAGAAGAAAT GGAGATAACA CTGAACAGTG
    GCTTCAAGAT GCCGATCGTC GGCTTAGGAG TATGGAGAAT GGAGAAGGAA
    GGGATTCGAG ACCTTATCCT CAATGCCATC AAGATCGGCT ATCGCCATCT
    CGACTGTGCT GGTATTCACT TGTTCTCTCA AAACCTTCTC TTTCTGATCT
    TTGTTGCTTC TGGTTTGTCT GGATATGTGA TTTGAATACT GGGTTTGTTT
    TAACTTTTTG ATAGTTGGAA TCTTTCTTGG AAAATATGTC TTTAAGATTT
    GTTTTTTTTT TC

AT2G21250.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 23237 Blast hits to 23200 proteins in 2399 species: Archae - 409; Bacteria - 15760; Metazoa - 2015; Fungi - 1895; Plants - 1372; Viruses - 0; Other Eukaryotes - 1786 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21250.2

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR