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ET14251

CSHL Arabidopsis genetrap mutant lines

Original: ET14251

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14251

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 334364 [Map]; Strand: c
      • AT4G00760.1 - [+] show detail - pseudo-response regulator 8
        Distance: -887; Region: promoter
      • AT4G00780.1 - [+] show detail - TRAF-like family protein
        Distance: -368; Region: promoter
    Flanking Genome Sequence: ET14251 - 5-prime edge 
    TACTTTCTCT CTGTCGAAAC CCGTCTAACT TCAGAGCTGG TGTGAGTCTT 
    CAAGTCATAT GGGTCCTGAG GTCTCTCCCC AAAAGTTAAG TATCTTATCT 
    ACTAATCTCT CACTGTTCTC TGAGTCATTC CGGAGGAAAT TCGTATCTAC 
    TATACATTTA GTACCGAATG GATGTATATT CAGTATTGGA TAGTTAAACT 
    TGTTCCTTAA GAAAAAAAGA AATCGAGTTC ATGGACTGAG ATTTGCAAAC 
    GAGGTCTTAT CATATCTTCT TGTAAAATAC CCGATCGGGT TCTGTTCTCA 
    AATAATTTCA GGTATCAGGT ATTACATGAA CCGAAATTGA TATCCGTGAG 
    TATTTTTTAT TACCCGAACA TATATATACA TATGAGGACA TATATACTGA 
    TAACTTGAGT TTGTGAATTG TTTAATGATT GGATTATGGA ACAAGTTAAA 
    AAAAAGGTTT ACTTCTTGTT TTTTATTATT GGCATAAATG AAAACTTCTT 
    ATAATTTTAT GGATAGTTTT ATATATGTTT GGGTATATCT GGACAAGGTT 
    TGGGTAAATA ATATTGAAAC CCAAAATAAT TTTGGTTATT TATTGGGTTC 
    TTCAACCTAT ACCCGAAGAG AACCTATAGC TTAAATAATA CGTATAATCG 
    AACCAGTCTT AAACTTCTAA ACCGAACCCG AAAGACTCGA TCCAAACCCG 
    ACCCGAATAC CCAAATTTC

AT4G00760.1

Model type
Protein coding
Short Description
pseudo-response regulator 8
Curator Summary
Encodes a response-regulator like protein.
Computational Description
pseudo-response regulator 8 (APRR8); FUNCTIONS IN: two-component response regulator activity, transcription regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00780.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT4G01390.1); Has 760 Blast hits to 681 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 739; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR