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ET14261

CSHL Arabidopsis genetrap mutant lines

Original: ET14261

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14261

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20963631 [Map]; Strand: w
      • AT1G56050.1 - [+] show detail - GTP-binding protein-related
        Distance: -88; Region: promoter
    Flanking Genome Sequence: ET14261 - 3-prime edge
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC CTATGTTAAT 
    AAACATTTCG AGAATCTGAG TTTAAACTAA TCATTTTGGT TCTTGTTTAT
    AATTCATTTT GACAACTGTT TCATTAGCTT AAGCTAATTA TTTTCTTAAT
    ACTCATAATA CTTCTTCATA AGATTATTGC TGTCTTGACA ATTAGACAAA
    AACAAGCTTC ACACATTTTG ACAACAGTGA TTAGATAAAG GATCTGTGAT
    TAGATAGATA AAAGCACAAG AGCAAGTTTT ACATACATCA CAGAATGTTC
    AAAACTTCCA TAATCAAAAT AAAAAAGGTT TGCTAGAAGA AAGAAAAAGT
    TTCAAGACAA AACTAAAAAG AGAATCACAG AGAGCCGATA GTTATTTGGG
    GGAGGAACTT GGAGTCTACT TGGATCGCTG TCTCATCTTT CGACGCTTCC
    TCTTTAATCT CCTCATGCGC TTCTTCTTCC ACTGCAAAAT ATTATCCACA
    ATTTTGTTAG TATCAAATTC ATTTGTATAG GATAACAAAC AATACACATG
    ATGAAAGAAA CACGACATAA ATGGAGAGTT TTCATTTCAA CAACCTTAAC
    CTATATAACA AGATCTCTAT CTATAGTTTA GATAAACCAG
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20963703 [Map]; Strand: w
      • AT1G56050.1 - [+] show detail - GTP-binding protein-related
        Distance: -16; Region: promoter
    Flanking Genome Sequence: ET14261 - 5-prime edge
    CTTTCTCCAT AGGGCAAATA CGTATATTAA AAATAAGTGA TTGTGAAAAC 
    AAAGGACCAA TCAACACATT CTCTGTAATT TGCGATAAAA AGATAATAGA
    CAAAAGAGAC GACGAACACA CTTAGAAATT TTGAGCTGAG AGGCTGAGAA
    AATTAGCACC ATGGCGAGAG CAGCTTGTAG CAGTGTCGTC ACGGCTATGG
    CTTTGTTACC CTCTAAGTCT CTTCTCTGTA GAAACCAGTT ATTATTCTCC
    GGTAATTCCA AGTTCGTCGG AGTTTTGACT CTCCAGAAGC GATGCTTTTC
    CTCCAAAGTA AGCATGAGTT TGAAAGCTGG TATCGTCGGT CTTCCTAACG
    TCGGAAAGTC TACTCTTTTT AACGCCGTCG TAAGTCCCAT TGATGCACTT
    GTCGTTCTTC TTTACTCTTC

AT1G56050.1

Model type
Protein coding
Short Description
GTP-binding protein-related
Computational Description
GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink).
Link
InterPro Scan - TAIR