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ET14311

CSHL Arabidopsis genetrap mutant lines

Original: ET14311

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14311

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26606410 [Map]; Strand: c
      • AT1G70560.1 - [+] show detail - tryptophan aminotransferase of Arabidopsis 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET14311 - 5-prime edge
    ATCCTACTTT CTCCCTGCTC TGATGGTTCC GGCAGGGTTA TTAGGCGACG 
    TCACTAGCTC GCTGAACGGA CCCTTTTTCG TCGAAACACA CATGACGTCT
    CCTTCCCACT TGTACATACA AGACCGAACC ACATGTCGCC TCCTCCACAT
    ATGTCTATAT TCAAAACAAC AATAAAACTT TTATAATCTC AAGAATGAAA
    TTATTAAGAA TGGGAGGAAT AAAAGTGGGG ACATGAGCAT GTTACTGATG
    TCTTTGCACA TGAATCTACA ACACATGTAG TATGTAAGAA GGAAAAGTGT
    TTTGTAAAAA ATTGTTAAAA TCAAAAAGAA AAAAAAATGG GGGATCGATG
    TGTTGGGTTG TGTTCAAAAA ACATGTCTGT CACTGTGTCT TTTAAATCTC
    CAATCTTGCT TTTCAAAAAC AACGCCCACT GAATCTTTGA TTCACATCAA
    ATCAACTTTA TTTTTAAAAA CGACTTACGA TTATAGATAA AAATACATTA
    ACATTCTAAT GAAGCTTCTT CAAAGCAA

AT1G70560.1

Model type
Protein coding
Short Description
tryptophan aminotransferase of Arabidopsis 1
Curator Summary
TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.
Computational Description
tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link
InterPro Scan - TAIR