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ET14318

CSHL Arabidopsis genetrap mutant lines

Original: ET14318

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14318

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 556260 [Map]; Strand: w
      • AT5G02500.1 - [+] show detail - heat shock cognate protein 70-1
        Distance: 0; Region: exon1 (CDS)
      • AT5G02500.2 - [+] show detail - heat shock cognate protein 70-1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14318 - 3-prime edge 
    GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCTTGCGT CGGAGTATGG 
    CATACGCGAC CGTGTTGAGA TCATTGCTAA TGATCAAGGA AACAGAACCA 
    CGCCATCTTA CGTTGCTTTC ACCGACTCCG AGAGGTTGAT CGGTGACGCA 
    GCTAAGAATC AGGTCGCCAT GAACCCCGTT AACACCGTTT TCGGTACGTG 
    TCTCGTTTTC TTCTCTCTCG A

AT5G02500.1

Model type
Protein coding
Short Description
heat shock cognate protein 70-1
Curator Summary
encodes a member of heat shock protein 70 family.
Computational Description
heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to cold, response to virus, response to heat; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 34264 Blast hits to 33945 proteins in 4852 species: Archae - 163; Bacteria - 16558; Metazoa - 3831; Fungi - 1761; Plants - 1266; Viruses - 306; Other Eukaryotes - 10379 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02500.2

Model type
Protein coding
Short Description
heat shock cognate protein 70-1
Curator Summary
encodes a member of heat shock protein 70 family.
Computational Description
heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR