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ET14323

CSHL Arabidopsis genetrap mutant lines

Original: ET14323

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14323

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 195066 [Map]; Strand: c
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: ET14323 - 5-prime edge
    CATGCTTTTG GTCGAGAAGC AGCTTGTGAG ACAGTGGTCC ATGGCGGAAA 
    CTAAACATAT TCATAAATCC CCACATGCAC CCTAACTGTT CCCTCTCCTG
    TCGAGCAGCA GCACGACGTT GTGTTTTCTT CGCCATGGCT TTAAATGCTA
    ATGCTCCTTC CTAATCTTCT CTAACTTTGT GCCTTCTTTA AATGCTTAGG
    AGTACTTAAA AAGAGAAGAA AGAATTAGCC TTCCTAAACA CTGCAATGGA
    ATTCTTGAGA AATAAATTAA GATAACATGT AAGAAGTAAA GGATCCTCTA
    CCAGTTCCCT AAAGCAAACT CCTTTTATAA TTTGCTTACT TGTTCAACTA
    ATAAGGCCAA GATTAAGGAG AACTAAAAAC ACACAAAGCT TGAGAGATAC
    AGACTAATGG AGCAAATAAG ATACCTTTCC CTATTGGAAA AAGACAGAAG
    AGGAAAGTAC AAGAAAGTAC CTCTTAGATT CTCCTGAATT CCTTAAATTC
    CAAACTTCAT ACAAGGGCAA CAGCGATTGT AGCTAGATTT CATCTGCTTT
    GCTTACGTTT GAGCAAAGCC ATAGAAAAAT CCAATATATA TAAAAAAAGT
    GTTGCAAGTT G

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR