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ET14337

CSHL Arabidopsis genetrap mutant lines

Original: ET14337

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14337

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5706249 [Map]; Strand: w
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 115; Region: intergenic
      • AT2G13690.1 - [+] show detail - PRLI-interacting factor, putative
        Distance: 258; Region: intergenic
    Flanking Genome Sequence: ET14337 - 3-prime edge 
    TTTTCATCCC TATCTATCCG TATGTTTCTT ACGATATACA TATATGTTTT 
    CACTTAAAAA CAGAGGGATA CAAACAAAAA GAAGCAAAGA NATTGTGGGG 
    AAAAGTTGTA AGAGTGCTAA AGAGTGACGA TGAGGGAAAA GAAAAATCAG 
    AGAAAGTTAG TCTGAGACTT ATTTCTGCTT CTCCTCTCTC GA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5706338 [Map]; Strand: w
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 204; Region: intergenic
      • AT2G13690.1 - [+] show detail - PRLI-interacting factor, putative
        Distance: 169; Region: intergenic
    Flanking Genome Sequence: ET14337 - 5-prime edge 
    TCCTCTTTCT CCCTGCGGAT AGATTTAAGT GAAAGTTTTC TATAATAAAT 
    AGTTGAGGTT ATGTAGCAAG AGGAATTTTC TTGCATTTGT TTTGGTATTC 
    TCAGTTTCCT CATTCCTCGT CAATTACTGT CAAAACAGTA TTATGGAAGC 
    AAACGATATG AAATGTTTTA ATGGTATTTT TGTGGCACTG TAGCTACCAT 
    AATCATAAAC AATTACTCAC AAATATAGTA ATGCCCGATA GAAAGAAAGT 
    ACCATTTTGT GTTTTGTACT TGTTGCTTTT TCAAACCTTA CGACTAATTT 
    AGCTCCAAAA AACATCCGAA ACGAACATAT CATGCGGGTG GAGACAAAAG 
    GAGAGAGAGT TATATTACAG TCTAAATTTC CATAAAAGCT AAAACCTAAC 
    ATA

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G13690.1

Model type
Protein coding
Short Description
PRLI-interacting factor, putative
Computational Description
PRLI-interacting factor, putative; BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT5G60050.1); Has 259 Blast hits to 259 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR