1. Home
  2. Mutant Lines
  3. ET14353

ET14353

CSHL Arabidopsis genetrap mutant lines

Original: ET14353

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14353

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1408879 [Map]; Strand: c
      • AT3G05040.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -682; Region: promoter
      • AT3G05050.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: ET14353 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACTTGTGGT TGAGTCAGGT 
    GCTCCAATGG GAGCCAAAGG GCCTGACCAA GTTTGAAATG GCTCTTTGGA 
    GTATGATGAT GTGAATGAGT TTGTGCTATA CGGTATCTCT GATGGATCCA 
    GTCGCCTTGA AGATCCCACC TGAAAACCGA GTGACCCGTC TTGATGCGGT 
    GGAGGAAACT TCTCGCTCTT GCTCTTTGCA TTCGCGTGTG TGATGATACG 
    CATCCTCTGT TTTAAGAGAA CAAGTTCAAA GTACTCAAGA CATTAACCAA 
    TCAAAGATTC ACTTCTTTTT TTGTTTTAAA TTCTTACATC AATGTTAGAC 
    TGGTTCTCGG CGTTGGCTTC AGGAGCCGGC ATTGCTCTTG GGGCTCGTTC 
    TCGGGGTCTC ATTCTTCTTC CGCTCTCTCC TTGGGCCTTG CGCGCTTCTC 
    TTTGTCTGCA GAAATGAATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19641704 [Map]; Strand: w
      • AT2G48000.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -901; Region: promoter
      • AT2G48010.1 - [+] show detail - receptor-like kinase in in flowers 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14353 - 5-prime edge 
    CCTACTTTCT CCCTGCGTCA GACGGGTTCC TTTCTCCCGC CACCTGAGTC 
    TGCTGCTTCT TGCTGGGCTG CTCTCCAGTC TTCCGTCGCC GGTTTCCTCC 
    CTCGCTTTGA CGTCCGATCC ACCTGCGGTT TCCAGACGCC GTGGATTTCG 
    CAGGGGTGCA TGGACATCAC CACCAGGTCT CAATTCGAAT CCCTTATCCC 
    TAACTCCTCC CTCGCCACCA CCGCCATGCG CTGTAACACC TCTCTCGAGA 
    GCAATACCCC TTGCGCCTCC TGCACTCAGA GCCTCTCCGC GTTTCAGCCC 
    TATCTCTCCG GTCCATCCCT CGGTAATGTC TCCGACTGTG CTTCATCTCA 
    CTCGACCAAA GCCGATGCTT TCGCCAATTC CTTGGGCCCC ACCGACAAAG 
    GCACCGCCAA ATGCTTGGTT CAGCTCAATT TGGCTTCTCC CACTAGGTCC 
    GGGGCTAACA A

AT2G48000.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G30780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48010.1

Model type
Protein coding
Short Description
receptor-like kinase in in flowers 3
Curator Summary
receptor-like serine/threonine kinase (RKF3)
Computational Description
receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05040.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Curator Summary
Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.
Computational Description
HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05050.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54610.3); Has 123800 Blast hits to 122339 proteins in 4507 species: Archae - 88; Bacteria - 13433; Metazoa - 46693; Fungi - 12712; Plants - 30574; Viruses - 455; Other Eukaryotes - 19845 (source: NCBI BLink).
Link
InterPro Scan - TAIR