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ET14363

CSHL Arabidopsis genetrap mutant lines

Original: ET14363

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14363

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185070 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -556; Region: promoter
    Flanking Genome Sequence: ET14363 - 5-prime edge 
    CTACTTTATC CCCACCCAAA TCACGAAAAT GCCCGAAAAA GTACTTAAAG 
    GTCAAAATTT GGGGTCGACA AAAAGTCAAT GGAAATGTTC CATTGTCCTG 
    CTTCTTTCGT CGGAGGGCTG TCTTTGGGCT TTCCGAAAAG GTATCACATG 
    CCAAGTTTGG CCTCACGGTC TAAAAGTTAT GGAGTCATAA AGTTTTAACC 
    AAAAAAAAAA GGTTAAACCT AAAAAGGGGG TGCCACCCGG GGACTTCCCG 
    GGGGGGCCCC CCTCCTAATA CTTCCTTCCC CCAAACCCCC TTAAATGGGG 
    AATTTCAAAG GGAACCGGGG CATTAAGGGT GGGTTGAACC CCCCCCTTAA 
    GAATTGCAAA GGAATCCGAT TATTTCTTTC TCCCCCGACC AAAGGAACCC 
    TTCCCCGGGG GGCCCCCCCC CTTTTGGGGG ATCCCCCCTT TAGTTTTAAC 
    GAGTTTTGGT GGTTGAAAAA ATTCCAAAAA AATGCTTGAA AAAGTAATTT 
    TGGGCCCCGA ATAAACCCCA AATCCCAAAA ATGCCCCAAA AAGTTCTTAA 
    AGGGCAAAAT TTGGGGCCC

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR