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ET14369

CSHL Arabidopsis genetrap mutant lines

Original: ET14369

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14369

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16381727 [Map]; Strand: c
      • AT4G34215.2 - [+] show detail - Domain of unknown function (DUF303)
        Distance: -425; Region: promoter
      • AT4G34215.1 - [+] show detail - Domain of unknown function (DUF303)
        Distance: -420; Region: promoter
      • AT4G34220.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET14369 - 5-prime edge 
    CAATTAGGAG TGATGTCGCT CGCCATGAGG ATGCTGCAAT GGCGTGCTTT 
    AGGTTAGGGA TTGAATGTGT CTCTTCCTTG CCTCAGAAGC GACCATCCAT 
    GAAAGAATTG GTGCAAGTGT TGGAGAAAAT TTGTGTTTTA GTTTGATTTC 
    TTAATTCGTA TAGCCTAAGT CGTTTTGGCA ATATAGAAAG TTATGTGTTA 
    TGTATGTTTT AGATGTGTTG CTTAATGCTT ACTTTACCCT CGCATAATAC 
    TAACTCTTAC TTTAGAGTTT AGAATGTGTT TCACTGTTTT GTTATGTTAT 
    ATCACAACCA AAAAGCTATA TAAAAATTAG AATCTTAACC GATGAAGCCA 
    ATTAAACCAA CACAACGGGA ATCACTTAAA ATTAACTCGG TCTAACTTCC 
    TAACCAAACT TTTAAACAGA CCGACCCAAA CCGGACCAAG ATTCTAGTGT 
    CCACGCCTCA ACATCATCTT CTCCGATCAA CTCTGATGCT CACCCCACCA 
    AACTTTACTT TCTATTCAGA CAAGACATCT CGATAGCTTA TTTCTATG

AT4G34215.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34215.2

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34220.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G15300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR