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ET14391

CSHL Arabidopsis genetrap mutant lines

Original: ET14391

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14391

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5701389 [Map]; Strand: c
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: intron26 (CDS)
    Flanking Genome Sequence: ET14391 - 5-prime edge
    TCATCCACTT TATCCCTGCG CTCACCTCTT TGATGATAAT ACCACATAAT 
    CCTGTGACAT TATATCTTTT CTTAGTATCA ATTAAATGAA TGAAAACTCA
    ATAGAGGGAC TGAAATTGCA GGTTGGAGCA CATATATATG TGAAAGGTTA
    AGAAAACTAT TTTATTATCA AAACAGAGGA ATGTTGACGC ACTTAAAAAT
    GCCACCTTAG GAGGAGAAAT GTTACTACAA TACGTCAGAA AATCAAGTAG
    AGACATGGTA GAGAACATCT ATTATCAAAA CTAATAAGAC AGCCAGTAGC
    TTCAACAGAA GAGAAAAGTT GGAGTGCTGG TTTCCTTATA GATTCTTAAT
    GATTTATAAA GTGCTTCATA AATCATAATC AAGAACTTTT CTGATGAATG
    AGGAAATACC TTTTCTCATT CTCCCCAATT ACCAAGGTGT GCAAGACATG
    TTTGAAAGAT TCGTAGCATT CAATGACAGC ACATTTCATA TATTCGTCTG
    CGCATATGCG CTTCCAGAGG TCAGAATCTC TTGTTCGAAA CTGAGCTGCC
    ATATCCAATG CTATCGGTAT CTGTAACAAG ATGAGAAGTT TAGCAATAAG
    AAGAAAACGG TATTTTTGAT GACAAAGGGA GACCACCAAC CTTGCTTGCA
    AGCAAAAATG GTGGCCACTG AAT

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR