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ET14413

CSHL Arabidopsis genetrap mutant lines

Original: ET14413

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14413

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 206586 [Map]; Strand: w
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01460.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET14413 - 5-prime edge
    CACGAAGCTT GGCAGAGAAA GTTGCATCTG TAATTGGCTG TACTGTTATT 
    GCCATGGAAG ATTACCGAGA TAGTTTGGAC GATGGTAATG AGTTGGAAAC
    ATTAGATTTT GATGCTTTAG TCCAGAATTT GGAGGTACTT CATTACTCAG
    AGATTTGTGT TTGTGAAACG TCTGTTGAGT AATGACTTAG GTTTGACTAA
    CTCGACTCTT TCTATAAATA GGATTTGATC AATGGAAAAG ATACTCTTGC
    TCCGGTTTTT GATTTCCAGC AAAAGAAGCG TGTTGATTCC AAGATGGTGA
    AGACATCCTC TGGTGTGGTA AGTCATAAAT GTGATTTTGG TTTTGGTTTT
    GGTATGGCTC CTATGGTTTT ACGTTTTGGT TTGTTGTAGG TTATTGTTGA
    TGGGACGTAT GCTCTCCATG CAAGATTGCG TTCCTTACTG GATATTCGGG
    TTGCAGTGGT AAGATTTTCT CCTCCTAGAG CAGTTATTGG TCTAGCTAAT
    GTACAACCAT GATATCATTT ATTCTCTCTG GGGTTAGGTT GG

AT2G01460.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, kinase activity, nucleotide binding, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), ATPase, AAA+ type, core (InterPro:IPR003593), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 3953 Blast hits to 3156 proteins in 1342 species: Archae - 38; Bacteria - 3073; Metazoa - 244; Fungi - 122; Plants - 227; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01460.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1).
Link
InterPro Scan - TAIR