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ET14423

CSHL Arabidopsis genetrap mutant lines

Original: ET14423

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14423

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19608368 [Map]; Strand: c
      • AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
        Distance: 0; Region: exon1 (CDS)
      • AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14423 - 5-prime edge
    GGAAGAGGGA GATTCGTTGC AGGAGTCGCA GAGAAGTGAC CTGAAGTGTT 
    TGGCGAAGAG TTGGTTGGCG ACGTGGACTT GCTTGTCGCA GGCGAGGCAG
    AGCTTGGCGG AGTCAGCTTT GCAGTAGACA AGAGCCACGG AGGAGTCGCA
    ATAGTCGCAG AGGCGGTCAC GCTGATGACC TTCTTCTGCT TCCATGGGAG
    GAGCTTAGAG GAGACGACGC CGACAGTTTT GGTAAGAAGA AGAAGTTGAT
    CTTTTCTTGG GATATTTTGG GGCAACAAAA CCAAATTTGG TGGCTTATGT
    AAAAGCCATA TCTTAATTGC ATTCTAGGTA CTGAATGACG TTAAAGT

AT2G47890.1

Model type
Protein coding
Short Description
B-box type zinc finger protein with CCT domain
Computational Description
B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47890.2

Model type
Protein coding
Short Description
B-box type zinc finger protein with CCT domain
Computational Description
B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR