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ET14460

CSHL Arabidopsis genetrap mutant lines

Original: ET14460

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14460

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 471204 [Map]; Strand: c
      • AT2G02000.1 - [+] show detail - glutamate decarboxylase 3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET14460 - 5-prime edge
    TTCCATCCTA CTTTCTCCCT GGGGCTACCT TATGATAGAC CTAATATTGT 
    AACCGGAGCC AATAATCAGG TAAACCAAAA CAAAAATTGA TTAAATTTTA
    AACCGGTTTA GGTCTATGTT TACATTGACT CAATTTCCGG TTCAATACAG
    GTTTGCTTGG AGAAATTTGC AAGGTATTTT GAAGTGGAGC TTAAGGAAGT
    GAAGCTGAGA GAAGGATATT ACGTGATGGA CCCTGACAAA GCGGTTGAAA
    TGGTAGACGA AAACACTATA TGCGTCGTGG CCATCCTCGG TTCGACACTA
    ACCGGACAAT TCGAAGACGT TAAGCTCCTC AACGACCTTT TAGTCGAGAA
    AAACAAGAAA ACCGGGTAAT TGAATCAAAA CCAACTAACA AATTAATTTT
    ATATACTTTT GCCTAGAAAT ATTACAATTT CTAATGTGAG ATATATTTGC
    TTAGAAATAT TTTATTTTTT GAATGAATAT AAAACTTATT AACCAAAACA
    AAACCATATA TGTTTACATT ATATGCTTCC TTGTATCGAA TGGTGTTTTA
    AATACTGATT AAAAAATGTT TTGCTTAAAA ATATAACAAT TTATAATGTG
    AGATATTCAA GCATTCTAAT ATCAAACCGA TAAACAACAA CAAACTGATT
    ATTAATTTAT TTAACCGGTT TGGTTCCGGT TTAATATATT TGTAGATGGG
    ATACGCCGAT TCACGTGGAC GCAGC

AT2G02000.1

Model type
Protein coding
Short Description
glutamate decarboxylase 3
Computational Description
glutamate decarboxylase 3 (GAD3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2817 Blast hits to 2814 proteins in 863 species: Archae - 192; Bacteria - 1666; Metazoa - 146; Fungi - 354; Plants - 282; Viruses - 7; Other Eukaryotes - 170 (source: NCBI BLink).
Link
InterPro Scan - TAIR